Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0318 ATGGGAAAAGCCTCTAGTTCTTCCTCTTCCTCTATCAGTAGCAACAACCACCCACTTATCTCCACTGCTTCATCTCTCACCCGCCTCCATAATTCTGATCACCTTCCCACAGATCTCAGGCTTGGTCTTAGCATTTCATCAGCAACTCAACATGTTGGCTCTTCTGTTTCAAGGGGGCATCAACCATCAGATTGGATCCCAAACCAGCGTGCTTATCATGGGGCTGCAGAAGTAAATGATTGTGGAGATCATGGCAGCTTGTTTGTGAAGGTGTACATGGAAGGCATTCCCATAGGCAGAAAACTTAATCTGGTGGCTCATGATGGTTACCATGAGTTAGTGAGGACTCTGGAAAACATGTTTGACACTACCATTCTCTGGGGCACAGGGATGGATGGGGTGCAACCAGAGAGGTGCCATGTGCTAACATATGAGGACGAAGAAGGAGATTTGGTGATGGTGGGAGATGTTCCTTGGGAAATGTTCCTATCAACAGTGAAGAGATTGAAGATAACGAGGGTGGACGCATTCGGGTGTTAA 540 0.4704 MGKASSSSSSSISSNNHPLISTASSLTRLHNSDHLPTDLRLGLSISSATQHVGSSVSRGHQPSDWIPNQRAYHGAAEVNDCGDHGSLFVKVYMEGIPIGRKLNLVAHDGYHELVRTLENMFDTTILWGTGMDGVQPERCHVLTYEDEEGDLVMVGDVPWEMFLSTVKRLKITRVDAFGC 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0318 179 SUPERFAMILY CAD & PB1 domains 83 171 - -
Mibi02g0318 179 Pfam AUX/IAA family 79 173 IPR033389 -
Mibi02g0318 179 Gene3D - 81 178 - -
Mibi02g0318 179 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 36 174 IPR003311 GO:0005634|GO:0006355
Mibi02g0318 179 ProSiteProfiles PB1 domain profile. 86 176 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0318 Mibi-ChrMibi02 3160426 3161271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0318 90 171 B3 DNA Binding Superfamily AT4G23980 40.244 1.10e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi02g0318 AUX_IAA 4.4e-29 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0318 02 3160426 3161271 Mibi06g2662 06 46665749 46666590 CCT