Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0313 ATGGGGAGGCACTCTTGCTGCTACAAGCAAAAGCTTCGCAAAGGCCTCTGGTCCCCTGAAGAGGACGAAAAACTCCTCAGGCATATCACAAAGTATGGCCATGGCTGTTGGAGTTCTGTTCCTAAGCAAGCAGGCTTGCAGAGATGTGGAAAGAGCTGCAGGCTGAGGTGGATCAATTACTTAAGGCCTGATTTGAAGAGAGGCACATTCTCACAAGAAGAGGAAAACCTCATCATTGAGCTTCATGCAGTATTAGGGAACAGGTGGTCTCAGATTGCAGCACAGCTTCCAGGAAGAACGGACAATGAAATAAAGAATCTGTGGAATTCATGCCTGAAGAAGAAGCTGAGGCAAAGAGGGATAGACCCTGTGACACATAAACCATTAACAGAGGTTGAAAATGGAGAACAGGACAAAGATGGAGAGAAAGTTATTGCAGGAGCAGTGGGTTCCAATAATGAATTGAACCTCCTGAAATCAGAAAGCTCCAGGTCGGATGGAACTTCCTATGAGCACAAACCATGTTCAACTAATATTGCCCCTAATAAAGCCTATGCACATGACATGGAGGGTTCTTCTTCCACATCCAAGATTAACATCCCAGATTGTTCCAGTAACAAAGACTTGTTCCTGGACAGGTTCATCACCAGCAGCCACCAGGAAAGCTACCCCACTAGTTTAGATTTCATGTCCAATTTCCCTCTTCACATGACCTATAATAACAATCCTCCCACTACTGACTCTTCTCGTTGGTTCACTCCCCAAACTGGAGGAATTAGACCATTTGATATCAATACGGGATTCACCTCCAGTACTTCCATGTCCAGTACTGTATTTCCACTTTCAACCTCATCGTTTCTGCCAACTAATTCTGCTTGCTACAAGCCTTCCCTCCCATCTGATGATTCATTCTCCATGAATGAATCCCAGTACTGGGAAGCCACTGCTTCCAACCATGGCAATATTAATGTTTCTTGGGGCTTGACAGATTGTGGTTCTGCTAAAGAGAATAATCATAATCATCAGATTAATAATATGATGGATCAGAGTCAGACAGAAGAAGGGAGGTGGGCTGAGTACCTTCATAGTAATAACTCAATCTTAATGCTGGCGGCTGTACACAATCATCAAGCTCCTGATGAATCTTTGTGCAACGATATAAAGCCAGCCTCACATTTGGTGCCTGATTCTTTAGGAGCTATTTTGCCTCATCATCATCACAAGCAGCAGCAAGATCATCATCATCATCATCATTATCATCATCAAACTTTACAGACTTCTGCAATATTCACAAAGGACATGCAGAAGCTCACGGCAGCGTTCGGACATATATAG 1335 0.4375 MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPVTHKPLTEVENGEQDKDGEKVIAGAVGSNNELNLLKSESSRSDGTSYEHKPCSTNIAPNKAYAHDMEGSSSTSKINIPDCSSNKDLFLDRFITSSHQESYPTSLDFMSNFPLHMTYNNNPPTTDSSRWFTPQTGGIRPFDINTGFTSSTSMSSTVFPLSTSSFLPTNSACYKPSLPSDDSFSMNESQYWEATASNHGNINVSWGLTDCGSAKENNHNHQINNMMDQSQTEEGRWAEYLHSNNSILMLAAVHNHQAPDESLCNDIKPASHLVPDSLGAILPHHHHKQQQDHHHHHHYHHQTLQTSAIFTKDMQKLTAAFGHI 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0313 444 Gene3D - 69 143 - -
Mibi02g0313 444 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi02g0313 444 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mibi02g0313 444 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi02g0313 444 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi02g0313 444 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi02g0313 444 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi02g0313 444 CDD SANT 17 61 IPR001005 -
Mibi02g0313 444 PANTHER MYB DOMAIN PROTEIN 55 1 348 - -
Mibi02g0313 444 FunFam Myb transcription factor 11 67 - -
Mibi02g0313 444 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mibi02g0313 444 MobiDBLite consensus disorder prediction 155 181 - -
Mibi02g0313 444 CDD SANT 69 109 IPR001005 -
Mibi02g0313 444 MobiDBLite consensus disorder prediction 155 176 - -
Mibi02g0313 444 MobiDBLite consensus disorder prediction 407 422 - -
Mibi02g0313 444 FunFam MYB transcription factor 68 140 - -
Mibi02g0313 444 SMART sant 13 63 IPR001005 -
Mibi02g0313 444 SMART sant 66 114 IPR001005 -
Mibi02g0313 444 Gene3D - 11 67 - -
Mibi02g0313 444 MobiDBLite consensus disorder prediction 405 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0313 Mibi-ChrMibi02 3106961 3108466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0313 1 139 MYB Transcription Factor Family AT4G01680 93.525 2.67e-94 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi02g0313 Myb_DNA-binding 2.1e-14 CL0123