Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0298 ATGGCTTCCACTCTTTTCACTCTGATTACTTTGTTTCTAGCTTTCTCTGTCCTTTCTCTCCAGATCATTGAGGCAGAAGCAGAAGAACCTCGCAGTCTCAAGCTTAACTCTCATATACTTCAGGAGTCTATTGTTGAACAGGTTAATGGAAATCCAAAAGCAGGGTGGAAAGCTGCCATGAGTCCTCGTTTCTCAAATTATACAGTTGGACAATTTAAGCACATCCTAGGGGTCAAGCAAACATCTAGAAATGAATTAAGAAGTACCCCTGTCAAAACTTATCCTAAAGCATTAAAATTGCCAAATGAGTTTGATGCAAGAACAGCTTGGAAGCAGTGTAGCACAATTGGAAAAATTCTAGAAGTTGCTGACTCTTCTTCTTTGATGAACACATGGAATGGTCACTGTGGTTCTTGCTGGGCATTTGGCGCCGTTGAATCATTATCAGATCGTTTCTGCATCCATTTTGGCGTGAATGTGTCACTCTCTGTTAATGATCTTCTCTCATGCTGTGGATTTTTATGTGGAGCGGGCTGTGATGGAGGTGATCCCCTGAGTGCATGGCAGTACCTTGTCCGCCAGGGTGTTGTTACTGAAGAGTGTGACCCATACTTTGATCAGATTGGTTGTTCTCACCCTGGTTGTGAACCTTTATATCCAACACCTGCATGTGCGAGGAAGTGTGTCAATGGTAACCAGCTTTGGAGCCAGTCAAAGCATTATAGCGAAAATGCGTATAGGGTCAACTCTGATCCCTATGATATCATGACAGAAGTTTATAAGAATGGACCAGTTGAGGTCGCTTTTACAGTTTATGAGGATTTTGCTCACTACAAATCAGGAGTATACAAACATGTCACAGGTTTTCCGATGGGAGGTCATGCAGTAAAACTAATCGGCTGGGGAACCAGTGATGATGGAGAGGACTATTGGCTTCTTGCAAATCAGTGGAATAGAAGTTGGGGTGATGATGGCTACTTCAAGATCAAAAGAGGCTCAAACGAGTGTGGTATTGAAGAAGAGGTTGTCGCTGGTTTGCCTTCCACGAAAAATCTTGTGTTGGAGGTTGCTGATGTGGACGACGATTTGGCTGTTTCATTCTGA 1104 0.4312 MASTLFTLITLFLAFSVLSLQIIEAEAEEPRSLKLNSHILQESIVEQVNGNPKAGWKAAMSPRFSNYTVGQFKHILGVKQTSRNELRSTPVKTYPKALKLPNEFDARTAWKQCSTIGKILEVADSSSLMNTWNGHCGSCWAFGAVESLSDRFCIHFGVNVSLSVNDLLSCCGFLCGAGCDGGDPLSAWQYLVRQGVVTEECDPYFDQIGCSHPGCEPLYPTPACARKCVNGNQLWSQSKHYSENAYRVNSDPYDIMTEVYKNGPVEVAFTVYEDFAHYKSGVYKHVTGFPMGGHAVKLIGWGTSDDGEDYWLLANQWNRSWGDDGYFKIKRGSNECGIEEEVVAGLPSTKNLVLEVADVDDDLAVSF 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0298 367 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 292 302 IPR025660 -
Mibi02g0298 367 SUPERFAMILY Cysteine proteinases 46 347 IPR038765 -
Mibi02g0298 367 CDD Peptidase_C1A_CathepsinB 101 345 - -
Mibi02g0298 367 FunFam cathepsin B-like protease 2 33 352 - -
Mibi02g0298 367 Pfam Peptidase family C1 propeptide 40 81 IPR012599 GO:0004197|GO:0050790
Mibi02g0298 367 PRINTS Papain cysteine protease (C1) family signature 294 304 IPR000668 GO:0006508|GO:0008234
Mibi02g0298 367 PRINTS Papain cysteine protease (C1) family signature 310 316 IPR000668 GO:0006508|GO:0008234
Mibi02g0298 367 PRINTS Papain cysteine protease (C1) family signature 133 148 IPR000668 GO:0006508|GO:0008234
Mibi02g0298 367 Pfam Papain family cysteine protease 133 345 IPR000668 GO:0006508|GO:0008234
Mibi02g0298 367 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 53 339 - -
Mibi02g0298 367 SMART pept_c1 100 346 IPR000668 GO:0006508|GO:0008234
Mibi02g0298 367 Gene3D Cysteine proteinases 31 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0298 Mibi-ChrMibi02 2964083 2968234 Dispersed/Wgd