Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0288 ATGAAGTTCTCCTTCTCTCTCCTTCTCCTCCTCCCTCTCGCTACGTTTTTGGCTGCTGTCATCGCATCTGATCCCGATCCTCTCCAAGACATCTGTGTCGCCGATCTCACTTCCGCGATCAAAGTGAACGGGTTTGTGTGCAAGGATGCTACGAAGGTGAATGCCACGGACTTCTCCTCCGACATATTGGCGAAACCAGGAGCCACCAATACCACATTTGGGTCCGCCGTCACCGGAGCCAACGTTCAGAAAATCGCCGGTCTCAACACACTCGGCGTCTCACTCGCTCGCATTGACTACGCGCCTGGTGGGATCAACCCACCCCACACGCACCCACGTGCCACCGAGATCGTGTTTGTGCTCCAAGGTGAACTTTTTGTGGGATTCATTACAACCTCCAACCAGCTCATTTCCAAGAAGATTAAGAAAGGTGAGGTTTTTGTGTTCCCAAAAGGTTTGGTTCATTTCCAAAAGAATGTTGGGTATGGGGCTGCCTCTGTTATAGCTGCTTTCAATAGTCAGCTTCCTGGTACTCAATCTATCGCCACCACCTTGTTCGCCGCCACTCCGCCCGTGCCGGATAATGTTTTGGCCCAGGCCTTCCAGGTGGGTACTAAGGAGGTTGACAAAATTAAGGCTGGCCTTGCACCCAAGAAGAAACAGTAG 666 0.5195 MKFSFSLLLLLPLATFLAAVIASDPDPLQDICVADLTSAIKVNGFVCKDATKVNATDFSSDILAKPGATNTTFGSAVTGANVQKIAGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLQGELFVGFITTSNQLISKKIKKGEVFVFPKGLVHFQKNVGYGAASVIAAFNSQLPGTQSIATTLFAATPPVPDNVLAQAFQVGTKEVDKIKAGLAPKKKQ 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0288 221 PRINTS Germin signature 109 129 IPR001929 GO:0030145
Mibi02g0288 221 PRINTS Germin signature 139 159 IPR001929 GO:0030145
Mibi02g0288 221 PRINTS Germin signature 172 187 IPR001929 GO:0030145
Mibi02g0288 221 CDD cupin_OxOx 24 215 - -
Mibi02g0288 221 ProSitePatterns Germin family signature. 104 117 IPR019780 GO:0030145
Mibi02g0288 221 Gene3D Jelly Rolls 23 217 IPR014710 -
Mibi02g0288 221 SMART Cupin_1_3 60 209 IPR006045 -
Mibi02g0288 221 SUPERFAMILY RmlC-like cupins 55 214 IPR011051 -
Mibi02g0288 221 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 20 213 - -
Mibi02g0288 221 FunFam germin-like protein subfamily 2 member 1 23 217 - -
Mibi02g0288 221 Pfam Cupin 63 208 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0288 Mibi-ChrMibi02 2864327 2865480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0288 18 219 Miscellaneous Gene Families AT3G05930 56.650 4.68e-82 242