Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0283 ATGGGAAGACACTCTTGCTGTTACAAGCAGAAACTCAGGAAAGGCCTCTGGTCTCCCGACGAAGACGAGAAGCTACTCAATTACATCACCAAGCACGGCCATGGCTGTTGGAGCTCCGTCCCCAAACTCGCCGGCTTGCAGAGATGTGGCAAGAGCTGCAGGTTGAGGTGGATAAATTACCTGAGGCCTGATTTGAAAAGAGGAGCATTCTCTCAGCAGGAAGAGGATTTGATAATTGAACTCCATGCAGTCCTGGGCAACAGGTGGTCACAGATTGCAGCTCAGTTACCGGGAAGAACCGACAATGAGATTAAGAATCTATGGAATTCCTGCCTCAAGAAGAAGCTCAGGCAAAGAGGCATTGACCCAAACACCCACAAGCCACTCTCTGAGGTTGAGAACGACAAGGACAAGCCCCCCTCAGCCGACAAAAACCATCACAAAGAACTGAGTATAGCAGAGCCTGCTGCAAAACCAAAGCCAAATAATGCAATAATGCCTTCGGAGCGATACCCACTTGAAGTTTCTTGCGGCTCCAAGATCAGCAATAGCTGCACCATTAGCAACAGCAGACCCACCCAGGATTTGTTCCTGGATAGCTCCACCATTTCCAGTTGCGGTCCCTCTGACATGATGAGTTACTTCTCTTTCCAGCAGTTGAACTATCCACCACATGCCGCTCTCTCCTCAAATCCCAACGGCTCCCTCTGCTTCATGTCAGCTTCAAGTTCCTCTCAGTTGATGATATCAGAGCTCAATTCTAGTATGGCTCCCACTATGTTTAATTCTTTGCCAACCTCAATTTTCCCAACAACACATGTAAGTACCACCGTTAGTCTCCAGTCAGATAATCCTTCCATATCCTCTGGCGATATTGATGGGGTTCAGAACTGGGAAGCCAGTATCCTTGCTAACAACGGAACCAAAAGCAATGGTCGCAATAATAACTTCCTTGAGAATACGAGTTTAGCATGGGGATTGGCAGATTCTGTGAAGGCTGATAAAGATGCTCAAGTACCCCTACAAGCAGAACAAGAAGACCTTAAATGGTCTGAGTATCTGAACACACCATTTTTTCTGGGAACCACATCACAGAATCAAAACTGTCAATCTATTTACAGTGAGGTTAAACCAGAGACAGGGTTCATAGCAGATGAACCAGGTACCAGTTGGCACACCCAGCATCCGTCCGTTTTTCAGGCTTCGGATATCTACACCAAGGATCTGCAAAGATTCTCAATGGCTTTTGGACAAACCCTGTAA 1263 0.4695 MGRHSCCYKQKLRKGLWSPDEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQQEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPNTHKPLSEVENDKDKPPSADKNHHKELSIAEPAAKPKPNNAIMPSERYPLEVSCGSKISNSCTISNSRPTQDLFLDSSTISSCGPSDMMSYFSFQQLNYPPHAALSSNPNGSLCFMSASSSSQLMISELNSSMAPTMFNSLPTSIFPTTHVSTTVSLQSDNPSISSGDIDGVQNWEASILANNGTKSNGRNNNFLENTSLAWGLADSVKADKDAQVPLQAEQEDLKWSEYLNTPFFLGTTSQNQNCQSIYSEVKPETGFIADEPGTSWHTQHPSVFQASDIYTKDLQRFSMAFGQTL 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0283 420 MobiDBLite consensus disorder prediction 119 154 - -
Mibi02g0283 420 Gene3D - 11 67 - -
Mibi02g0283 420 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi02g0283 420 SMART sant 66 114 IPR001005 -
Mibi02g0283 420 SMART sant 13 63 IPR001005 -
Mibi02g0283 420 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi02g0283 420 CDD SANT 17 61 IPR001005 -
Mibi02g0283 420 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi02g0283 420 FunFam Myb transcription factor 11 67 - -
Mibi02g0283 420 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mibi02g0283 420 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi02g0283 420 MobiDBLite consensus disorder prediction 119 165 - -
Mibi02g0283 420 CDD SANT 69 109 IPR001005 -
Mibi02g0283 420 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mibi02g0283 420 Gene3D - 69 146 - -
Mibi02g0283 420 FunFam MYB transcription factor 68 140 - -
Mibi02g0283 420 PANTHER MYB DOMAIN PROTEIN 55 1 309 - -
Mibi02g0283 420 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0283 Mibi-ChrMibi02 2822797 2824262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0283 1 420 MYB Transcription Factor Family AT1G09540 48.037 1.91e-116 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi02g0283 Myb_DNA-binding 9.6e-15 CL0123