Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0264 ATGGGGACTGAAAATCCTGGACGTTCTAGTTTTCCTGCTAGGCCTGCCACAATACCTTTTGCTCCTCCACAGACTATGTCACCGTTTTCATCAACTGGTCCTGTGGTTGGATCTCAGCCTCCTTTCTCCCGGCCTGCTCCTCCTTCTGCTCCCCAACCTTCAGTGCCATTGTCATCATCCGGACCCACAATCGCACCAGGGGCACCCAATTTTAGGCCTACCCCTCCAGGAAGGTTTAATGATCCATCCGTTCCTTCGCCACCAATGTACAATGTCCCACCTGCTGGTGGACCTTTTCAGCGCTTTCCAACTCCACAGTTTACCCCAACAGCCCAAGCTCCTCCACTTGCTCCACCCATTGGACAACCTTCAATCCCTCCTTCTGTGAATCAGGCACCCCCTTTTCCTGCAGCCATTCAACCACAAACACCAATTGTTCCCATGGGTTCTCCCCCGCAAAGTGCTCCTCCTGCACCTTTGAAGTCTAGTGTCCCTCCTCTGTCAGATTCATCATTTCCAGGGCCTAGGCCCAATTTGCAGCCATCTTTTCCTGGATATGCCCGCAAGCAGGCTGGCAGTGAAATTCAAGGTCCATCCATGCATCCATCTTTTCCCTCTAACCAAGGTAATTATGCGCCTCCTCCACCTGCTCTATCTCATCAAGGGGGCTATGTTCCACCGCCTCCTGTGGCGGCTCCATTAGGCATGCAGCAGATGCAACAACCGGGATATGGACCTTCTGTTGGTGCCATTCAGGGCCTGGCAGAAGACTTCAGTTCACTCTCGGTTCAAACTCGTCCTGGTTCAATGGACAAAGTGGTTGATGCTAAAGAACTTCCACGGCCACTAGACGGTGATGTGGAGCCAACATCTCTGGCTGACGTTTTCCCCATGAACTGTAACTCCAGATATCTACGGCTGACAACCAGTGCAATTCCCAGCTCCCAGTCCTTAGCTTCAAGGTGGCATCTACCTCTTGGAGCAGTTGTTTGTCCACTTGCAGAAGCTCCTGATGGGGAAGAGGTGCCTATAATCAATTTTGCTCCAACTAGTGTCATACGGTGTAGGAGATGTCGCACCTATGTGAATCCATATGTGACATTCACAGATGCTGGAAGAAAATTCCGGTGCAATGTTTGCACTTTGCTAAATGATGTGCCTAGTGAATATTTTGCTCAATTAGATGCCACTGGTAGAAGAGTTGATTTGGATCAAAGACCTGAGCTTACAAAGGGTACTGTGGAATTTGTTGCTCCTGCTGAATATATGGTGCGACCTCCTATGCCTCCAGTGTACTTCTTCCTCATTGATGTTTCCATATCTGCGGTTAGAAGTGGAATGATTGAGGTTGTGGCCCAAACAATCAAGTCATGTCTAGATGAGTTGCCTGGCTATCCACGAACCCAAATAGGGTTTGCGACTTTTGACAGCACAATTCATTTTTATAATATGAAGTCTTCCTTGACTCAGCCACAGATGTTGGTAGTCTCAGATCTGGATGACATATTTGTTCCACTTCCAGATGATCTCCTTGTTAATTTATCTGAATCCAGAAGTGTGGTGGAGACCTTCCTTGATAGTTTACCCTCCATGTTCCAGAACAATGTAAATATTGAATCTGCCTTTGGTCCAGCTCTGAAGGCTGCGTTCATGGTTATGAGTCAACTTGGAGGGAAGTTGTTAATTTTCCAAAATACACTGCCATCTCTTGGAGTTGGACGCTTAAAATTACGTGGAGATGATGCTCATGTGTATGGGACTGATAAAGAACACATGTTAAGGTTACCAGATGATCCATTTTACAAGCAAATGGCTGCTGAGTTTTCTAAGTACCAGATCTGTGCTAATGTGTATGCATTTAGTGACAAGTACACTGACATTGCATCCTTAGGAACTTTGGCAAAATATACTGCCGGTCAAGTATATTACTATCCAGCTTTCATATCAACCATTCATGGGGAGAAGTTGAGGCATGAGTTAAGGAGAGACTTAACTAGAGAAACTGCCTGGGAAGCTGTACTGCGCATTCGATGTGGAAAAGGTGTTCGCTTCACAACTTTTCACGGGAACTTCATGCTAAGGTCTACCGATTTGTTGGCACTTCCAGCTGTAGATTGTGATAAAGCTTTTGCTATGCAGTTATCTCTTGAAGAAACGTTGCTGACAACTCAGACTATGTATTTCCAAGCTGCATTGCTATATACTGCATCTTGTGGGGAAAGACGGATCAGAGTACACACTGCTGCAGCTCCAGTAGTGACAGACTTGGGAGAGATGTATCGCCTGGCTGATACTGGTGCCATAGTTTCTCTACTTAGTAGGCTAGCAATAGAGAAAACATTGTCTAACAAACTGGAAGATGCAAGGAGTGCTGTACAGCTAAGAATTGTCAAGGCCCTCAGAGAATATAGAAATCTATATGCTGTGCAACATCGCTTGGCTAACAGGATGATATATCCCGAGTCTCTAAAATTTCTACCATTGTATGGCTTAGCACTTTGTAAATCAACACCTCTCCGTGGAGGGCATGCTGACACTCTGCTGGATGAACGGTGTGCAGCAGGATACACAACGATGGCTCTACCGATAAAAGGGCTGTTGAAATTTATATATCCAAGCTTGATTCGACTTGATGAATTTCTGTTGAAGTCTGATGAAGTAAAAAACATTGAGAAAAGGTTACCATTGACTGGTGAGAGCTTGGATTCTAGAGGCCTTTATGTATATGATGATGGCTTCCGATTCATTTTATGGTTTGGTAGAGTGCTTTCACCTGATATAGCTATGAATTTGCTCGGGGCAGACTTCGCTGCAGAATTATCAAAGGTTACTCTTAAGGAGCATAATAATGAGATGTCAAGGAAGCTAATCAGGATACTCGAGAAACTGAGAAATACTGATCATTCATATTACCAGTTGTGCTATCTTGTGAGGCAAGGCGAACATCCCAGAGAAGGATTCCTTATCCTTGCAAATCTTGTTGAGGATCAGATGGGTGGTAACAGTGGGTATGCTGATTGGATGCTTCAGCTATCCCAACAGGTGCAACAACAATAA 3057 0.4537 MGTENPGRSSFPARPATIPFAPPQTMSPFSSTGPVVGSQPPFSRPAPPSAPQPSVPLSSSGPTIAPGAPNFRPTPPGRFNDPSVPSPPMYNVPPAGGPFQRFPTPQFTPTAQAPPLAPPIGQPSIPPSVNQAPPFPAAIQPQTPIVPMGSPPQSAPPAPLKSSVPPLSDSSFPGPRPNLQPSFPGYARKQAGSEIQGPSMHPSFPSNQGNYAPPPPALSHQGGYVPPPPVAAPLGMQQMQQPGYGPSVGAIQGLAEDFSSLSVQTRPGSMDKVVDAKELPRPLDGDVEPTSLADVFPMNCNSRYLRLTTSAIPSSQSLASRWHLPLGAVVCPLAEAPDGEEVPIINFAPTSVIRCRRCRTYVNPYVTFTDAGRKFRCNVCTLLNDVPSEYFAQLDATGRRVDLDQRPELTKGTVEFVAPAEYMVRPPMPPVYFFLIDVSISAVRSGMIEVVAQTIKSCLDELPGYPRTQIGFATFDSTIHFYNMKSSLTQPQMLVVSDLDDIFVPLPDDLLVNLSESRSVVETFLDSLPSMFQNNVNIESAFGPALKAAFMVMSQLGGKLLIFQNTLPSLGVGRLKLRGDDAHVYGTDKEHMLRLPDDPFYKQMAAEFSKYQICANVYAFSDKYTDIASLGTLAKYTAGQVYYYPAFISTIHGEKLRHELRRDLTRETAWEAVLRIRCGKGVRFTTFHGNFMLRSTDLLALPAVDCDKAFAMQLSLEETLLTTQTMYFQAALLYTASCGERRIRVHTAAAPVVTDLGEMYRLADTGAIVSLLSRLAIEKTLSNKLEDARSAVQLRIVKALREYRNLYAVQHRLANRMIYPESLKFLPLYGLALCKSTPLRGGHADTLLDERCAAGYTTMALPIKGLLKFIYPSLIRLDEFLLKSDEVKNIEKRLPLTGESLDSRGLYVYDDGFRFILWFGRVLSPDIAMNLLGADFAAELSKVTLKEHNNEMSRKLIRILEKLRNTDHSYYQLCYLVRQGEHPREGFLILANLVEDQMGGNSGYADWMLQLSQQVQQQ 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0264 1018 Pfam Sec23/Sec24 helical domain 764 867 IPR006900 GO:0006886|GO:0006888|GO:0030127
Mibi02g0264 1018 Pfam Sec23/Sec24 trunk domain 427 663 IPR006896 GO:0006886|GO:0006888|GO:0030127
Mibi02g0264 1018 Pfam Sec23/Sec24 beta-sandwich domain 669 752 IPR012990 -
Mibi02g0264 1018 Pfam Sec23/Sec24 zinc finger 353 390 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Mibi02g0264 1018 Gene3D von Willebrand factor, type A domain 429 666 IPR036465 -
Mibi02g0264 1018 MobiDBLite consensus disorder prediction 108 163 - -
Mibi02g0264 1018 Gene3D - 300 752 - -
Mibi02g0264 1018 MobiDBLite consensus disorder prediction 23 38 - -
Mibi02g0264 1018 Gene3D - 299 411 - -
Mibi02g0264 1018 MobiDBLite consensus disorder prediction 40 55 - -
Mibi02g0264 1018 PANTHER SEC24-RELATED PROTEIN 129 1015 - -
Mibi02g0264 1018 SUPERFAMILY Zn-finger domain of Sec23/24 344 426 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Mibi02g0264 1018 Gene3D Sec23/Sec24 helical domain 753 1015 - -
Mibi02g0264 1018 MobiDBLite consensus disorder prediction 219 233 - -
Mibi02g0264 1018 SUPERFAMILY vWA-like 427 666 IPR036465 -
Mibi02g0264 1018 FunFam protein transport protein Sec24D isoform X1 429 666 - -
Mibi02g0264 1018 Gene3D Severin 872 996 IPR029006 -
Mibi02g0264 1018 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 882 1017 IPR036180 -
Mibi02g0264 1018 CDD Sec24-like 427 668 IPR041742 GO:0006886|GO:0006888|GO:0030127
Mibi02g0264 1018 SUPERFAMILY Helical domain of Sec23/24 764 871 IPR036175 GO:0006886|GO:0006888|GO:0030127
Mibi02g0264 1018 SUPERFAMILY beta-sandwich domain of Sec23/24 199 762 - -
Mibi02g0264 1018 MobiDBLite consensus disorder prediction 1 250 - -
Mibi02g0264 1018 MobiDBLite consensus disorder prediction 68 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0264 Mibi-ChrMibi02 2605663 2612188 Dispersed