Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0263 ATGCAGTTTGTAATGCCCGAGCTTTTGTATAATTTCAATTACAATCTGCCTTACGAGGCCGAAGATATGGAAGAAAGCGAATCGTTTAGGTTCCGATTCACCGGTGAAGTTCGATTAGGGAAGAGAATGCCGGTGGGGAAATATTACTGCGACTATTGCGACAAGTACATACAGGACACTCCCACTGCTCGTAAACGTCATCTTCAAGGTGTCCACCACCTCCGTTCTAAAGCTCTCTGGTACGATTCCCTCCAATTTCAGGATCCTACTCAGGTTTATCCAGATGGATTTGTCAAAGGGGTTTGCAATCGCTTCGTCAATACGGGTTTTTGCCCGTACGGTGATTCTTGCAAGTATGCTCATCCAAGAAACTTGACCAATGCGAACCTTCAAGGGGGGATAATTGAGAATATGCAGCCAGCAGCATCAACAATGGCGACTAATTTGGTTGGCGGAGGCTCTGCAACAGGAAATGTGGTGCGAGACAGTATGGGAATGGCATGGGACAATATACCTCCATCTTTGAGGCCTCCTCCCGAGGGTGGATATCCAGCCCTTCCCTTTGTGGACTGGGGATAG 579 0.4767 MQFVMPELLYNFNYNLPYEAEDMEESESFRFRFTGEVRLGKRMPVGKYYCDYCDKYIQDTPTARKRHLQGVHHLRSKALWYDSLQFQDPTQVYPDGFVKGVCNRFVNTGFCPYGDSCKYAHPRNLTNANLQGGIIENMQPAASTMATNLVGGGSATGNVVRDSMGMAWDNIPPSLRPPPEGGYPALPFVDWG 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0263 192 SUPERFAMILY CCCH zinc finger 100 124 IPR036855 GO:0046872
Mibi02g0263 192 Pfam U1 zinc finger 47 78 IPR013085 GO:0008270
Mibi02g0263 192 Gene3D Classic Zinc Finger 45 96 - -
Mibi02g0263 192 SMART c3hfinal6 96 123 IPR000571 GO:0046872
Mibi02g0263 192 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 101 123 IPR000571 GO:0046872
Mibi02g0263 192 ProSiteProfiles Zinc finger matrin-type profile. 48 79 IPR000690 GO:0003676|GO:0005634|GO:0008270
Mibi02g0263 192 PANTHER NUCLEASE-RELATED 43 192 - -
Mibi02g0263 192 ProSiteProfiles Zinc finger C3H1-type profile. 96 124 IPR000571 GO:0046872
Mibi02g0263 192 SUPERFAMILY beta-beta-alpha zinc fingers 46 102 IPR036236 -
Mibi02g0263 192 Gene3D - 100 126 - -
Mibi02g0263 192 SMART ZnF_U1_5 45 80 IPR003604 GO:0003676|GO:0008270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mibi02g0263 zf-U1 6.3e-12 CL0361