Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0248 ATGGCGTCTTTGCACCCCAACTTAGACTCTATTCATTCCCCAACCACCCTTAAAAGTCCTACCAATTCTCACCATCACAATAATTCCCTCCAAACCATCCCATGGACATCCGACACCGAGCGTCGGATCTACTCCTCTAAGCTCCTCCAAGCTCTCCGCCACGTCCTCCGTCGCAAATCCGGCGCCGGCCGCCGCGAAATTCGAGAGACGGCCGATAGAGTTCTGGCGGCCACGGCCAAGAGCAGAACTCGATGGAGTCGAGCGATTCTGTCTTCTCCGCTAGGCCGTTGGAGATTGCAGAGGCAACACAAGAAGGTGAGGAGAGGATTGAAGAAACCGGAGATTAGGAGAGAGAGAAACCGGAGGTTACCGCCTCTGCAGAAGAAAGCGCGCTTTCTCGGCCGATTAGTTCCAGGTTGCCGTAAGATTTCCTTCCCGAATCTTCTAGAAGAAACCACCGACTACATATCCGCCTTGGAGATGCAAGTAAGAGCCATGACGGCCCTCGCCGAATTGCTCACCGCAACTGTCGCGCCCGCCGATCCTCTCGAGGTGTCTCGGCCGTGA 567 0.5538 MASLHPNLDSIHSPTTLKSPTNSHHHNNSLQTIPWTSDTERRIYSSKLLQALRHVLRRKSGAGRREIRETADRVLAATAKSRTRWSRAILSSPLGRWRLQRQHKKVRRGLKKPEIRRERNRRLPPLQKKARFLGRLVPGCRKISFPNLLEETTDYISALEMQVRAMTALAELLTATVAPADPLEVSRP 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0248 188 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 111 177 IPR036638 GO:0046983
Mibi02g0248 188 CDD bHLH_AtIBH1_like 115 170 IPR044549 GO:0006355
Mibi02g0248 188 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 37 173 IPR044660 GO:0006355
Mibi02g0248 188 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0248 Mibi-ChrMibi02 2485790 2486356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0248 35 166 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 48.684 1.29e-35 122
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0248 02 2485790 2486356 Mibi06g2715 06 47044743 47045294 CCT
Mibi02g0248 02 2485790 2486356 Mibi06g2715 06 47044743 47045294 ECH
Mibi02g0248 02 2485790 2486356 Mibi02g0248 02 2485790 2486356 ECH