Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0243 ATGACGGACCGTGTTTACGGGTTGAACATTAATAAGGAATCTGAAGATGTCAGAGTTGGTGACGTGTCTTCTTCTTCTTCACATCACTTCCCTCCTCCTCCTGCTGATTCCCAAACAACCGCCTCTGACCACTTCATCAAGACCCAAATCGCCAATCACCCTCTTTATCCCACCTTATTATCTGCTTACATCGACTGCCAAAAGGTGGGTGCTCCCCCAGAACTGGCTTCCCTCCTAGAAGGAATCAACAGTGAAAATCACCCCATCACTTCTCATTGTCACATAGCCATAGGCGACGATCCTCAACTCGACCATTTCATGGAATCGTACTGCGATGTTCTTCGTAGATACAAGGAGGAGTTGTGGAGGCCCTTCAACGAAGCCACCTTGTTTTTGAGCGATATCGAATCCCAGCTCCACAACCTTTGCAAGGAAACCCTCACAATCTCAACGGGATATCGATCCGAGGAGGCAGGTGTGAGTTCAGAAGAGGAAGCAAGTTATGGTGAGGCGGAAGGTGTGGAAGGTGCTGTATCTTGTGGGAGTTGCCAAGCTGATAAAGAGATCAAAGAAATGCTTCTTCGCAAGTACAGTGGATATCTCAGCAATCTGCGGAAGGAGTTCTTGAAAAAAAGGAAAAGTGGGAAGCTTCCAAAGGATGCAAGAATGACACTCCTCAATTGGTGGAACACCCATTACAGATGGCCTTATCCCACGGAGGAGGAGAAAGTGAGGCTATCGGAAATGAGTGGACTGAATCAAAAGCAGATAAATAATTGGTTCATCAATCAGAGGAAACGCCACTGGAAGCCATCTGATGATATGCGATTTGCCGTCTTGGAGGGTGTAAGTGGGGCCCCCTTCGGACCCCCCTTCTGCTTCAATGCTGCTCCTCCGTCTCCACCTCACCCTCATTGA 918 0.4826 MTDRVYGLNINKESEDVRVGDVSSSSSHHFPPPPADSQTTASDHFIKTQIANHPLYPTLLSAYIDCQKVGAPPELASLLEGINSENHPITSHCHIAIGDDPQLDHFMESYCDVLRRYKEELWRPFNEATLFLSDIESQLHNLCKETLTISTGYRSEEAGVSSEEEASYGEAEGVEGAVSCGSCQADKEIKEMLLRKYSGYLSNLRKEFLKKRKSGKLPKDARMTLLNWWNTHYRWPYPTEEEKVRLSEMSGLNQKQINNWFINQRKRHWKPSDDMRFAVLEGVSGAPFGPPFCFNAAPPSPPHPH 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0243 305 MobiDBLite consensus disorder prediction 16 40 - -
Mibi02g0243 305 Pfam ELK domain 188 209 IPR005539 GO:0003677
Mibi02g0243 305 Pfam KNOX1 domain 46 87 IPR005540 GO:0003677|GO:0005634
Mibi02g0243 305 CDD homeodomain 211 272 IPR001356 GO:0003677
Mibi02g0243 305 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 48 277 - -
Mibi02g0243 305 SMART ELK_2 188 209 IPR005539 GO:0003677
Mibi02g0243 305 SMART KNOX2_2 93 144 IPR005541 GO:0003677|GO:0005634
Mibi02g0243 305 MobiDBLite consensus disorder prediction 20 40 - -
Mibi02g0243 305 ProSiteProfiles ELK domain profile. 188 208 IPR005539 GO:0003677
Mibi02g0243 305 SMART KNOX1_2 44 88 IPR005540 GO:0003677|GO:0005634
Mibi02g0243 305 ProSitePatterns 'Homeobox' domain signature. 246 269 IPR017970 GO:0000981|GO:0006355
Mibi02g0243 305 SUPERFAMILY Homeodomain-like 210 278 IPR009057 -
Mibi02g0243 305 Pfam KNOX2 domain 97 143 IPR005541 GO:0003677|GO:0005634
Mibi02g0243 305 Gene3D - 206 278 - -
Mibi02g0243 305 Pfam Homeobox KN domain 228 267 IPR008422 GO:0003677|GO:0006355
Mibi02g0243 305 ProSiteProfiles 'Homeobox' domain profile. 208 271 IPR001356 GO:0003677
Mibi02g0243 305 SMART HOX_1 210 275 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0243 Mibi-ChrMibi02 2407010 2410807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0243 24 288 Homeobox Transcription Factor Family AT1G23380 51.282 8.26e-83 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Mibi02g0243 KNOX2 5.2e-23 No_clan