Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0223 ATGTGTAATCATATCTTTAATCAGATTCCAAGGGCAATTGTACTTTTCCATAACATTGGAGATTGTTTAATTTTAGAATGGGATGCTTTTTCAAGTTCGCGTGCCGTTTTCCTTTTTAATGCTTTGATGCTTATGACTCTTGTGATGAAGCTTGCCCTAGGGGTTTTATGTCCATTCACAGTGTCGTTCTTCAGGTTGATTTGTTCATTTGATTGCCTGAGGCCTTCATTAATTGGGTTGATGATCATGATGGATGTTCAGCAGAAGGAAACGTTTCGTGAGGGATTGATTGATAATAACAAGAAGTGTTGCGCTGATTGCAAAACTACCAAGACCCCACTCTGGAGAGGGGGACCTGCTGGGCCCAAGACTCTGTGCAACGCTTGCGGGATAAGATACAGGAAGAAGAGGGTTTCAACGGTGGGATTGAGAGGACAAGAGAAGAAGAGAGAGAAAACACAGAGTCGGAGTGGTGGTAGAGCTGTTGGTAATGATGGAAGCGATTTGAAGGAGTGTTTGAAGATGAATTTGGTGGCGTTAGGTGAGGAGGTTTTGCTGCAACGGTCACATTCTGCGGCGAAGAAGCAGAGATGGCAGAGGAGGAGGAGGGGGGAATTAGAGGAGGTAGAACAAGCCGCCTTCTGCTTGATGGCCCTGTCTTGTGGACTTGTTTTCGCTTGA 681 0.4523 MCNHIFNQIPRAIVLFHNIGDCLILEWDAFSSSRAVFLFNALMLMTLVMKLALGVLCPFTVSFFRLICSFDCLRPSLIGLMIMMDVQQKETFREGLIDNNKKCCADCKTTKTPLWRGGPAGPKTLCNACGIRYRKKRVSTVGLRGQEKKREKTQSRSGGRAVGNDGSDLKECLKMNLVALGEEVLLQRSHSAAKKQRWQRRRRGELEEVEQAAFCLMALSCGLVFA 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0223 226 CDD ZnF_GATA 104 160 IPR000679 GO:0006355|GO:0043565
Mibi02g0223 226 ProSiteProfiles GATA-type zinc finger domain profile. 98 156 IPR000679 GO:0006355|GO:0043565
Mibi02g0223 226 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 100 138 - -
Mibi02g0223 226 ProSitePatterns GATA-type zinc finger domain. 104 129 IPR000679 GO:0006355|GO:0043565
Mibi02g0223 226 MobiDBLite consensus disorder prediction 142 165 - -
Mibi02g0223 226 Pfam GATA zinc finger 104 138 IPR000679 GO:0006355|GO:0043565
Mibi02g0223 226 MobiDBLite consensus disorder prediction 142 156 - -
Mibi02g0223 226 SMART GATA_3 98 159 IPR000679 GO:0006355|GO:0043565
Mibi02g0223 226 Gene3D - 99 160 IPR013088 GO:0006355|GO:0008270
Mibi02g0223 226 PANTHER OS01G0976800 PROTEIN 98 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0223 Mibi-ChrMibi02 2255955 2258527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0223 97 226 C2C2-Gata Transcription Factor Family AT3G06740 47.328 3.41e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mibi02g0223 GATA 7.3e-18 CL0167