Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0213 ATGTCAACGGAGCGCCTGATTCAAGCTTCCGATGCAATGTCAGAAGCATTTCCCAATTCTCACTCCCTCAGGCAATGCGGCGAACCTGCTTGGATATTTGAAGAATTGCCCATCGCCACCATTGTTTCTGTTTCCAGACCAGACACCGGAGATATTATTAGTCCAATCCTTCTCTCTTACACCATTGAGTTGGAGTACAAACAGTTCAAATGGCGCTTAATGAAGAAAGCCTCACAAGTTCTCTACTTACATTTTGCTTTGAAGAAACGTGCATTGATTGAAGAATTTCATGACAAGCAGGAGCAGGTAAAAGAATGGCTGCAGAGCTTAGGAATATTTGATCACACAACGATGGTGCAAGATACTGAAGAACCTGACGATGGGACTGTGCCTTTACATAATGAAGACAGCATTAGGAACAGATATGTACCATCTGCGGCAGCCCTACCAATCATTCGTCCATCACTAGGAGGGCAGCAGTCAGTTGCAGATAAGGCAAAAGTCGCAATGCAGGGTTACTTGAATCATTTCCTTGGAAACTTGGATATTGTCAATTCTCGAGAGGTCTGCAAGTTCTTGGAGGTCTCTAGGTTGTCCTTTTTAGAGGATTATGGATCAAAAATGAAAGAGGGCTATGTAATGGTGAGGCGCTTATCAAATATCTCAACGGATTCAGATGTAACATGCTTTCCATGCCAATGGCTTGGTTTGTGTAACAACAACTGGTCCAAGGTGTGGGCTGTCCTAAAACCTGGCTTTTTGGCCTTGCTGGATGATCCTTTCAGCAACAAACCGATGGATGTAATTGTTTTTGATATCCTCCCTTCATCAAGTGAAGATAAGTGTTCCCCAGTATATCTAGCTGATCATGTCAAGGAACGAAATCCCTTAAGATATGCATTTAAGGTAACTAGCGGAAATGGGAGCATAGTTTTGAGAACTAGCAGCAGTGCCAAAGTTAAAGATTGGGTCACTAAAATTAACGAAGCTGGTCTTAGACCTCAAGAGGGTTGGTGTCATCCTCATCGGTTTGGTTCATTTGCTCCCATAAGAGGTTTGACTGAAGATGGAAGCCAAGCCCAGTGGTTTATTGATGGGAAGGCAGCATTTGAAGCAATTGCTTCCTCAATTCAGGAAGCAAAGTCAGAGATCCTTATCACTGGATGGTGGCTTTGCCCAGAGCTCTATCTGAAACGTCCTTTTCACTCTCATTCTTCCTTTAGGCTGGATTCATTACTTGAAGAAAAGGCTAAACAAGGGGTTAAGATATATGTGCTTCTGTACAAGGAGGTCTCTTTAGCTTTAAAAATCAACAGCATGTACAGTAAGAGAAGACTCCTCAACATTCATGAAAACGTGAGAGTATTGCGGTATCCTAACCATTTATCGACTGGCGTCTATTTATGGTCGCACCATGAAAAACTTGTAATCGTTGATTACAAGGTTTGCTATTTTGGAGGACTAGATTTATGCTTTGGCCGTTATGACACAACTGAACACAAAGTGGGTGATTTTCCTTCCCAAATATGGCCTGGAAAGGACTATTACAATCCAAGAGAATCTGAACCTAATTCATGGGAAGACACCATGAGAGATGAACTGGATCGTGAAAAGTATCCCCGCATGCCGTGGCACGACGTTCATTGTGCTATCTGGGGACCTCCCTGTCGTGACATTGCTCGTCACTTTGTTCAACGTTGGAACCATGCTAAGAGAACTAAAGCTCCAAATGAACATAACATTCCGCTACTTATGCCTCACCACCACATGGTCATCCCTCACTACATGGGAAGAAGCAAAGAGATGGATATCGATGGATGCAAAGAAGATGACAAGAAAGAAGTTGAAAGTCAGAGTTCGTCTTCATCGCAATCACCCCCTCGAGATACACCATTGCTTCTGCCTCAAGAAGCTGGTGGAGAAGATATCAAGTTAACTGGGAACAATATGAATTGCAATCTCATGGATCAGACAAGCTTTTGTGAAAGCCAAAATCCACACGACAAAACTTCAGAAGCTCAAGTGGAAGATTTTTTAAATGAATTTGATCCTTTTGACTCGGAGAGACAATTTCCCATGGATGCTTCAGATGATTGGTGGGAAACATCTGAAGAAGGTTACTGCGATGAAACTGTTATGGAATATGGAGACGTTGGTCGTCGTACTAAGTGTCGTTGTCAGGTAATCAGGAGTGTCAGCCATTGGTCTGCCGGAACAAGCCAGACTGAAGAAAGCATTCACACTGCTTATTGTTCTCTCATTGAAAAAGCGAAACATTTTATCTACATTGAGAACCAGTTTTTCATATCAGGCCTGGCAACAGATGATACCATACAAAACCGTGTATTGGAAGCATTATATAGGCGCATTTTACTGGCTCACAAAGAGCAAAAGCCTTTTAGGGTTATAATTGTGATGCCTCTATTGCCTGGCTTCCAGGTAAATTTTACTGGCTTGCTTTGCGTAATATTCACTCCTTTATGCAACAGGCTTGAAATAACAATTGTTGTAAATTGCCATTACCAGGGTGGCCTGGATGATTTTGGTGCAGCAACTGTGAGAGCCATAACACATTGGCAATATCGAACAATCTCTAGAGACTGCCACTCCATATTAGCCAACCTTAGAGCTGTGCTTGGCCCTAAGACTGAAGATTACATTTCTTTCTATGGTCTGCGTTCTCATGGTAGACTTTCTGCTGATGGCCCTGTGGTTACAAGTCAGGTCTATGTACACAGCAAATTGATTATTGTAGATGATCGTACTGTGATAATCGGATCTTCTAATATAAACGATAGGAGTTTGCTGGGTTCAAGAGACTCTGAGATCGGAGTGGTAATTGAAGACAAAGAGTTTGTCAAGTCATCTATGAATGGAAAACCATGGAAGGCTGGGAAACTTTCCTATAGCCTCCGTTGCTCCTTATGGTCTGAGCACCTTGGTTTAAATACTGGAGAGGTAAATAAAGTCAGTGATCCAGTAGCAAATACAACTTACAAGGACTTATGGTCAGCAACTGCAAAGGAAAATACTAAGTTATATCATGAGGTTTTTTCCTGCATACCGAATGATCACATACACTCCAGAGCTGCACTAAGGCAAAACATGGCTCACATGAAAGAGACACTCGGTCATACCACCATTGACTTTGGAATAGGCCCTGATCAAATAGAGCACGCAGATAAACTGAAGTGCATAAAGGGGCATCTTGTTTGTTTTCCTTTGGAATTCATGCGTGGAGAAGATTTAAGACCGGTATTCAATGAGACTGAGTTTTATGTATCTCCTCACGTATATCATTAA 3303 0.422 MSTERLIQASDAMSEAFPNSHSLRQCGEPAWIFEELPIATIVSVSRPDTGDIISPILLSYTIELEYKQFKWRLMKKASQVLYLHFALKKRALIEEFHDKQEQVKEWLQSLGIFDHTTMVQDTEEPDDGTVPLHNEDSIRNRYVPSAAALPIIRPSLGGQQSVADKAKVAMQGYLNHFLGNLDIVNSREVCKFLEVSRLSFLEDYGSKMKEGYVMVRRLSNISTDSDVTCFPCQWLGLCNNNWSKVWAVLKPGFLALLDDPFSNKPMDVIVFDILPSSSEDKCSPVYLADHVKERNPLRYAFKVTSGNGSIVLRTSSSAKVKDWVTKINEAGLRPQEGWCHPHRFGSFAPIRGLTEDGSQAQWFIDGKAAFEAIASSIQEAKSEILITGWWLCPELYLKRPFHSHSSFRLDSLLEEKAKQGVKIYVLLYKEVSLALKINSMYSKRRLLNIHENVRVLRYPNHLSTGVYLWSHHEKLVIVDYKVCYFGGLDLCFGRYDTTEHKVGDFPSQIWPGKDYYNPRESEPNSWEDTMRDELDREKYPRMPWHDVHCAIWGPPCRDIARHFVQRWNHAKRTKAPNEHNIPLLMPHHHMVIPHYMGRSKEMDIDGCKEDDKKEVESQSSSSSQSPPRDTPLLLPQEAGGEDIKLTGNNMNCNLMDQTSFCESQNPHDKTSEAQVEDFLNEFDPFDSERQFPMDASDDWWETSEEGYCDETVMEYGDVGRRTKCRCQVIRSVSHWSAGTSQTEESIHTAYCSLIEKAKHFIYIENQFFISGLATDDTIQNRVLEALYRRILLAHKEQKPFRVIIVMPLLPGFQVNFTGLLCVIFTPLCNRLEITIVVNCHYQGGLDDFGAATVRAITHWQYRTISRDCHSILANLRAVLGPKTEDYISFYGLRSHGRLSADGPVVTSQVYVHSKLIIVDDRTVIIGSSNINDRSLLGSRDSEIGVVIEDKEFVKSSMNGKPWKAGKLSYSLRCSLWSEHLGLNTGEVNKVSDPVANTTYKDLWSATAKENTKLYHEVFSCIPNDHIHSRAALRQNMAHMKETLGHTTIDFGIGPDQIEHADKLKCIKGHLVCFPLEFMRGEDLRPVFNETEFYVSPHVYH 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0213 1100 ProSiteProfiles PH domain profile. 206 332 IPR001849 -
Mibi02g0213 1100 SMART PH_update 207 334 IPR001849 -
Mibi02g0213 1100 Pfam PH domain 208 330 IPR001849 -
Mibi02g0213 1100 Pfam PLD-like domain 751 954 IPR025202 -
Mibi02g0213 1100 Pfam Phospholipase D Active site motif 467 494 IPR001736 GO:0003824
Mibi02g0213 1100 SUPERFAMILY Phospholipase D/nuclease 717 955 - -
Mibi02g0213 1100 CDD PLDc_vPLD1_2_yPLD_like_2 738 951 - -
Mibi02g0213 1100 Gene3D - 206 333 IPR011993 -
Mibi02g0213 1100 SUPERFAMILY Phospholipase D/nuclease 325 587 - -
Mibi02g0213 1100 PIRSF PLD_euk 663 818 IPR016555 GO:0004630|GO:0006654|GO:0048017
Mibi02g0213 1100 PIRSF PLD_euk 38 626 IPR016555 GO:0004630|GO:0006654|GO:0048017
Mibi02g0213 1100 PIRSF PLD_euk 838 1100 IPR016555 GO:0004630|GO:0006654|GO:0048017
Mibi02g0213 1100 SUPERFAMILY PH domain-like 236 330 - -
Mibi02g0213 1100 MobiDBLite consensus disorder prediction 606 635 - -
Mibi02g0213 1100 Gene3D Endonuclease Chain A 702 968 - -
Mibi02g0213 1100 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 907 934 IPR001736 GO:0003824
Mibi02g0213 1100 Gene3D Endonuclease Chain A 354 591 - -
Mibi02g0213 1100 SMART pld_4 907 934 IPR001736 GO:0003824
Mibi02g0213 1100 SMART pld_4 467 494 IPR001736 GO:0003824
Mibi02g0213 1100 CDD PH_PLD 184 330 - -
Mibi02g0213 1100 CDD PLDc_vPLD1_2_yPLD_like_1 360 504 - -
Mibi02g0213 1100 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 467 494 IPR001736 GO:0003824
Mibi02g0213 1100 PANTHER PHOSPHOLIPASE D 163 811 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0213 Mibi-ChrMibi02 2141217 2148120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0213 32 1100 Phospholipase D Gene Family (Wang group) AT3G05630 64.220 0.0 1403