Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0206 ATGAGAAGACTCGTTATAATAGGAGTGTCGAGTTTGTTGCTGGTGGCCGTCACCGTCGGTGTGAGCATGAACAAAAGTAACTCTGAATCAAGCCACCCAGAAGAAAACAACAAGTCACACGTGTCAGACTCCATGAAAACCGTGACAGAGCTTTGCCGTCCCACCGATTACAAAAAAGAGTGCGTAAACAGCATCAAATCGGAGGCCGGAAACATCACCGACCCCAAACAACTCACCAAAATCGCCTTCAACATCGACTTTCGCTCCGTACGTGAATCTCTCCTCAAAACCCAACTCTTACATGAGCTCGAGAAAGAGCTGAGATCCAAAATGGCTCTCGATTCTTGCATGCACCTCATGGATCTCTCCATCGAACAATTTCAAAGGTCAGCACAAAACATGGGATCTTTTGATCTCACCAATGTCGACGAGATGCTAATGAACCTTAAGTCTGGTATGAGAAAACTTCTGGCCACAGGGAAGCTGAGGCCAAATGTGGTTGTGGCCAAGGACGGCACAGGAAAAGTGAGGACCATAACGGATGCATTGAAATTGGCCCCTGTGATTAATGTGAAGCCTTTTGTCACCTACGTGAAGAAAGGAGTGTACCATGAGTATGTTCACGTCATGAACAACATGACCAGCATCGGACTGTACCTCAGCTACGGTGGACTTCATATTTGGCGACGCCGTTTCATTGTTCCAGAGCTGCACATTTGTGGTGATGAAGCCATTGAGGAACAACAATGCATCGTGACCGCACAGGGCAAGAAGGATAGACACCAGCCAACGGGCATAGTGATCCCAGGAGGCTCCATCATAGCGGATCCAAACTTCTAA 840 0.4762 MRRLVIIGVSSLLLVAVTVGVSMNKSNSESSHPEENNKSHVSDSMKTVTELCRPTDYKKECVNSIKSEAGNITDPKQLTKIAFNIDFRSVRESLLKTQLLHELEKELRSKMALDSCMHLMDLSIEQFQRSAQNMGSFDLTNVDEMLMNLKSGMRKLLATGKLRPNVVVAKDGTGKVRTITDALKLAPVINVKPFVTYVKKGVYHEYVHVMNNMTSIGLYLSYGGLHIWRRRFIVPELHICGDEAIEEQQCIVTAQGKKDRHQPTGIVIPGGSIIADPNF 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0206 279 Pfam Pectinesterase 165 218 IPR000070 GO:0030599|GO:0042545
Mibi02g0206 279 Gene3D - 159 223 IPR012334 -
Mibi02g0206 279 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 152 IPR035513 -
Mibi02g0206 279 MobiDBLite consensus disorder prediction 24 45 - -
Mibi02g0206 279 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 146 IPR006501 GO:0004857
Mibi02g0206 279 SUPERFAMILY Pectin lyase-like 163 278 IPR011050 -
Mibi02g0206 279 SMART PMEI_2 43 220 IPR006501 GO:0004857
Mibi02g0206 279 PANTHER PECTINESTERASE 7 216 - -
Mibi02g0206 279 Pfam Plant invertase/pectin methylesterase inhibitor 47 143 IPR006501 GO:0004857
Mibi02g0206 279 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 47 146 IPR035513 -
Mibi02g0206 279 CDD PMEI-like_3 51 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0206 Mibi-ChrMibi02 2106563 2108946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0206 2 214 Carbohydrate Esterase AT3G05610 30.537 8.14e-34 127