Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0167 ATGTCGAACAACACAAGCGGCGACAGTGGAAGCTTCTCGACGGAGAATGCCGGAGAAGGTGCCGTCAAACGGCCATTATCGGAGGCACTAATTGGTCAGTTTCACAGTCCAAATTCTCTCACTTCAACCACCACAACTAATAGCAATGGTTCCAACACACCTCCACCTCCTCCTCCTAAGAAGAAGAGAAACCTACCGGGAAATCCAGATCCAAGCGCTGAGGTGATAGCTCTATCACCAACCACACTTATGGCGACAAACAGATTCATCTGTGAGATTTGCAACAAAGGGTTTCAGAGGGATCAAAACCTGCAATTGCACCGTCGAGGCCATAACCTGCCATGGAAGCTCAAGCAAAGAAGCACAACTGAAGTACGAAAGAGGGTCTACGTCTGTCCCGAACCATCGTGCGTACACCACAACCCAGCCCGTGCGCTTGGTGACCTCACCGGCATCAAGAAGCACTTCTGCAGAAAGCACGGCGAGAAGAAGTGGAAATGTGACAAATGCTCCAAGAAATACGCCGTTCAATCTGACTGGAAAGCTCACTCCAAGATCTGTGGAACCAGGGAATACAAATGTGACTGTGGCACCATCTTTTCCAGGAGAGACAGCTTCATCACGCATAGAGCTTTCTGTGACGCATTGGCTGAGGAGAATAACAAAGCAAGCGACAGGCAGACAATGCAAGGAATGAACCCGAGCTTTAGGACGGGGCATCAAATTCAGAACATGGTTCCTTCATTACCAGTCAATAATAACAATATGGTCCCGAACATACAAGCTGGGAATATGGATAACAACAACAACAAGCATCCAATGTCGTCACTGCTTCAGGAGCTGATGCCAATGCCTGCGAATAATAAACCCTTTAATAACCACCATAATATGAACAATGCAGGAAATATATTCACGAGGAGCCTCTCTTGTAGTTCCTCAGCACCTTCTCCTCTTCAGCTAAATTCGAACTCACCCAACGTGGTCGCTTTTGAAGATAACGGCCACCAACTACCACTGAATACTGCAGCTTCCTCACAGCTCATGTCAGCGACGGCGCTGCTTCAGAAAGCCGCTCAAATGGGTGCAACTGTGAGCAACTCGTCGTCCATGGCGCCGCCGTCGTATGGTCCGAACGGTCTTTCATTCATGAACCACAACTACATGCAGAACAATAATGGGCAGGAGGATCAACATCATATATCGGTTGGTCAGTATTTGAATGGGAACGGGAGCATGGGAATGAACGGTGTGGATGTGTTTAACGCTATATTGGATCAGAGCAAAGCATTCTCGAAGATGATAGAGGAGAATAATGGAGGTGGTAATAATAATAATAATGGAGTTTTGCATGGTGGGGCTAATGGTGGTGGGGCTATTAACGTTGGTGCAAGTAGTAAGGGAAGTGGGGATATGCTGACTCTGGACTTCATGGGAATTGGAGGAGGAGGTTCACATGCAGCTTTCTACGGAAACCAACAGGGAGAAAAAGGTGCAATTAGAGGGGATGACGTCTGGAGAAATTGGTCTGTCAAGAATGCTGGATTTGAATCTTTCTCAGCAACTAGCAGCATCAACTGA 1578 0.474 MSNNTSGDSGSFSTENAGEGAVKRPLSEALIGQFHSPNSLTSTTTTNSNGSNTPPPPPPKKKRNLPGNPDPSAEVIALSPTTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRSTTEVRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNKASDRQTMQGMNPSFRTGHQIQNMVPSLPVNNNNMVPNIQAGNMDNNNNKHPMSSLLQELMPMPANNKPFNNHHNMNNAGNIFTRSLSCSSSAPSPLQLNSNSPNVVAFEDNGHQLPLNTAASSQLMSATALLQKAAQMGATVSNSSSMAPPSYGPNGLSFMNHNYMQNNNGQEDQHHISVGQYLNGNGSMGMNGVDVFNAILDQSKAFSKMIEENNGGGNNNNNGVLHGGANGGGAINVGASSKGSGDMLTLDFMGIGGGGSHAAFYGNQQGEKGAIRGDDVWRNWSVKNAGFESFSATSSIN 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0167 525 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 44 487 IPR031140 -
Mibi02g0167 525 MobiDBLite consensus disorder prediction 32 50 - -
Mibi02g0167 525 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 111 IPR013087 -
Mibi02g0167 525 Gene3D Classic Zinc Finger 68 135 - -
Mibi02g0167 525 SMART c2h2final6 130 160 IPR013087 -
Mibi02g0167 525 SMART c2h2final6 89 111 IPR013087 -
Mibi02g0167 525 SMART c2h2final6 165 185 IPR013087 -
Mibi02g0167 525 FunFam protein indeterminate-domain 12-like 68 136 - -
Mibi02g0167 525 Gene3D Classic Zinc Finger 144 224 - -
Mibi02g0167 525 MobiDBLite consensus disorder prediction 1 16 - -
Mibi02g0167 525 MobiDBLite consensus disorder prediction 51 65 - -
Mibi02g0167 525 MobiDBLite consensus disorder prediction 1 73 - -
Mibi02g0167 525 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
Mibi02g0167 525 SUPERFAMILY beta-beta-alpha zinc fingers 88 185 IPR036236 -
Mibi02g0167 525 FunFam protein indeterminate-domain 5, chloroplastic-like 143 222 - -
Mibi02g0167 525 Pfam Zinc-finger double-stranded RNA-binding 89 111 IPR022755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0167 Mibi-ChrMibi02 1743570 1746081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0167 42 370 IDZ Gene Family AT3G50700 52.722 2.64e-116 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi02g0167 zf-C2H2_jaz 7.7e-05 CL0361