Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0165 ATGGAGGATGAGAGACTGTTGCCGATAGCAAACGTGGGTAGGATAATGAGGAAAATAGTGCCAGGGAGTGCAAAGATATCAAAAGAAGGGAAGCAGTTAATGCAAGAATGTGCGACTGAGTTCATAAGTTTTGTGACGGAGGAAGCTTCTGACAAGTGTCACAAAGAGAATCGCAAGACCCTCAATGGTGATGACATCTGTTGGGCCCTTTGTGCTTTAGGGTTTGACAACTATGCTGAGGCCATTTCCTGCTATTTGCATAAATACAGGCAATCCCAAAGCCACAAATTCATCAATCATCACCTCCATCCCAAAACTAAACCTCCTCCTCATCATCTTCAAAATTCTTCTTCTTCAGCAAGAAGCGACAAGCAAAAAACTGGTGGAAGTTGTGCTGAGGAATCATCAGAGAATAGGGTTTGTGATGATCAAGAGAAGGCTCCTGATGCAACAGATCAATCTCCATCTTGA 471 0.4331 MEDERLLPIANVGRIMRKIVPGSAKISKEGKQLMQECATEFISFVTEEASDKCHKENRKTLNGDDICWALCALGFDNYAEAISCYLHKYRQSQSHKFINHHLHPKTKPPPHHLQNSSSSARSDKQKTGGSCAEESSENRVCDDQEKAPDATDQSPS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0165 156 SUPERFAMILY Histone-fold 3 96 IPR009072 GO:0046982
Mibi02g0165 156 MobiDBLite consensus disorder prediction 96 156 - -
Mibi02g0165 156 MobiDBLite consensus disorder prediction 110 134 - -
Mibi02g0165 156 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 2 126 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mibi02g0165 156 PRINTS CCAAT-binding transcription factor subunit A signature 72 90 - -
Mibi02g0165 156 PRINTS CCAAT-binding transcription factor subunit A signature 34 52 - -
Mibi02g0165 156 PRINTS CCAAT-binding transcription factor subunit A signature 53 71 - -
Mibi02g0165 156 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 6 70 IPR003958 -
Mibi02g0165 156 Gene3D Histone, subunit A 1 154 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0165 Mibi-ChrMibi02 1717111 1717581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0165 1 96 CCAAT-HAP3 Transcription Factor Family AT1G09030 69.072 2.63e-47 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mibi02g0165 CBFD_NFYB_HMF 6e-25 CL0012