Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0115 ATGGGGTGTGTGATTAGTCGAGAAGTGTCATCGGGAATAATCTCTGAGGTGAAAGAGGAGAAGAATTTGAGCAGCGAGTCGAGGAGGAAGGTAGATGAGAACGGTGGGAAACAAAAGGAAGAAAAGAGTGGTGGCGATGATGAAGGGATCGAGGCCCAGCGGCCAAGGGGAGAAAGGAGAAGATCAAAGCCAAACCCAAGGCTAAGTAATCCTCCCAAACATGTGAGAGGAGAGCAAGTAGCAGCTGGATGGCCGCCCTGGCTTACGGCTGTTTGTGGTGAAGCGCTCAGTGGATGGGTTCCTCGAAAGGCTGACACATTTGAGAAAATTGACAAGATTGGCCAAGGAACGTATAGCAATGTGTACAAGGCTAAAGATATGTTGTCGGGTAAGATTGTTGCTCTTAAGAAGGTTCGATTCGACAATTTGGAGCCTGAGAGTGTCAAGTTCATGGCTAGAGAGATTCTTATTCTCAGAAGATTGGATCATCCCAACGTTGTGAAGTTGGAAGGTTTAGTTACATCAAGGATGTCCTGTAGTCTGTATCTGGTATTTGAATACATGGTGCATGATTTGGCTGGACTTGCTGCAAGCCCAGGAATCAAGTTCTCAGAGCCTCAGGTCAAATGTTACATGCATCAACTACTCTCTGGACTTGAGCATTGTCATAAACGGCATATACTTCACCGTGATATTAAAGGATCAAATCTTCTCATTGACGATGGGGGAGTACTTAAGATTGCTGACTTTGGACTGGCTTCTTTCTTTGATCCAAACCACAAACACCCCATGACTAGTCGTGTGGTTACACTTTGGTATCGGCCTCCTGAGTTGCTTCTTGGTGCCACGGATTATGGTGTAAGTATTGACCTTTGGAGTGCAGGTTGTATTTTAGGGGAGTTATTGGCTGGGAAGCCGATTATGCCTGGTCGTACAGAGGTAGAGCAACTACATAAGATATACAAACTATGTGGCTCACCTTCCGATGAGTATTGGAAGAAGTCAAAGTTGCCTCATGCCACCTTATTTAAACCTCGAGAGCCATACAAGAGATGCATAAGAGAGACGTTTAAAGATTTTCCACCTTCTGCTCTGCCCCTTATTGACACGCTTCTTGCTATTGATCCAGCAGAAAGGAAGACAGCCTCAGATGCGTTAAATAGTGAGTTCTTCACAACAGAACCATTTGCTTGTGATCCTTCTAGTCTTCCAAAATATCCCCCAAGTAAGGAAATGGATGCTAAACGACGGGATGATGAAGCAAGGAGATTAAGAGCTGCGAGCAAAGCTCAGGCTGATGGTGCAAAGAAACCACGAACACGTGAACGTGGTGCTAAAGCATATCCTGCCCCTGACGCCAATGCTGAACTTCAGTCTAATATTGATAGAAGGCGTCTAATCAGCCACGCTAATGCCAAGAGCAAGAGTGAAAAGTTTCCTCCACCACATCAAGATGGACAACTTGGGTATCCTTTGGGAGCTTCGAATCATATAGATCCTGACATTGTTCCTCCTGATGTGGCTTTCAGTTCAACTTCATTTACTTATTCAAAGGAACCGTTCCAAGCTTGGTCAGGTCCCATAGGTAATACTGCTGCCATTGATGGACCAAAGAAGAAGAAGAAGCTCACAGCAGCTGATACATTGGATTTATCAAAACCACACAGAATTTACACCAAGGATAAGGTTAAAGGAAAGAAAATCAAAGCCTAG 1713 0.4478 MGCVISREVSSGIISEVKEEKNLSSESRRKVDENGGKQKEEKSGGDDEGIEAQRPRGERRRSKPNPRLSNPPKHVRGEQVAAGWPPWLTAVCGEALSGWVPRKADTFEKIDKIGQGTYSNVYKAKDMLSGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMVHDLAGLAASPGIKFSEPQVKCYMHQLLSGLEHCHKRHILHRDIKGSNLLIDDGGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVSIDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPHATLFKPREPYKRCIRETFKDFPPSALPLIDTLLAIDPAERKTASDALNSEFFTTEPFACDPSSLPKYPPSKEMDAKRRDDEARRLRAASKAQADGAKKPRTRERGAKAYPAPDANAELQSNIDRRRLISHANAKSKSEKFPPPHQDGQLGYPLGASNHIDPDIVPPDVAFSSTSFTYSKEPFQAWSGPIGNTAAIDGPKKKKKLTAADTLDLSKPHRIYTKDKVKGKKIKA 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0115 570 CDD STKc_CDK9_like 107 391 - -
Mibi02g0115 570 Gene3D Transferase(Phosphotransferase) domain 1 190 431 - -
Mibi02g0115 570 Pfam Protein kinase domain 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0115 570 MobiDBLite consensus disorder prediction 399 450 - -
Mibi02g0115 570 SUPERFAMILY Protein kinase-like (PK-like) 101 397 IPR011009 -
Mibi02g0115 570 PANTHER CELL DIVISION PROTEIN KINASE 105 395 - -
Mibi02g0115 570 FunFam probable serine/threonine-protein kinase At1g54610 190 431 - -
Mibi02g0115 570 Gene3D Phosphorylase Kinase; domain 1 94 189 - -
Mibi02g0115 570 FunFam probable serine/threonine-protein kinase At1g54610 94 189 - -
Mibi02g0115 570 MobiDBLite consensus disorder prediction 409 446 - -
Mibi02g0115 570 MobiDBLite consensus disorder prediction 1 79 - -
Mibi02g0115 570 SMART serkin_6 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0115 570 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Mibi02g0115 570 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Mibi02g0115 570 ProSiteProfiles Protein kinase domain profile. 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0115 570 MobiDBLite consensus disorder prediction 13 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0115 Mibi-ChrMibi02 1312683 1316282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0115 99 431 Core Cell Cycle Gene Families AT5G10270 51.862 6.79e-122 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mibi02g0115 Pkinase 5.6e-67 CL0016