Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0109 ATGAAGAACATTTTCAAGAAGCTTCACAAAGGGAGTAACCACGACCCAAATCGATCCAATGAATCACCGGCTTCGGCTTCCGTCGCATCACCTTCTGGTGCCTCCGATCAACGTACTTCACCCCTTCAAAACACTGCCACGTCTCCTTCTAGCCCATCTTCATTGTCTCCACCTACGTCAGCGACCCCTGCTACACAGCCCTCACCAGCTACGCCCAATCGACAGGACTATTTTTCTTCAGAGGAGGAGTATCAGGTTCAGCTTGCCCTAGCCATCAGTGCTTCCAAGTCTGATTTTCGGGATGATCCTGAGAAGGATCAGATCCGAGCGGCGACGCTGCTGAGCTTGGGAGGCCATCGAACTGATTCAGCAAGGAATAATGATGTGGCTAGAACGCTGTCCAGACAGTACTGGGAATACAGTGTGCTTGACTATGAGGAGAAAGTAGTTGATGGTTTTTATGATGTATATGGGCTTTCTACTGATTCATCAATGCAAGGAAAGATGCCCTCTCTGGAAGACCTTGAAGCAAATGCGGGGGATTCAAGTTTTGAAGTTGTCATTGTGAATCAAGCGGTTGATCCTGCCCTGGAAGAGTTGGTGCAAATCACGCAATGTGTAGCATTAGATTGTCCTGTCACTGATGTTGGTGTTTTGGTGCAAAGACTGGCTGAGCTTGTTACAGGGCATATGGGTGGCCCTGTAAAGGATGCTAATACCATATTAGCGAGATGGACAGAAAGAAGTACAGAGCTACGTACATCTCTTCAGACAAGTGTGTTACCTATAGGGTCCATAAATGTTGGCCTATCCAGGCATCGTGCTCTGCTTTTTAAGGTACTATCTGACAATATCAAGATGCCTTGTAGACTTGTAAAAGGTAGTCATTACACTGGTGTAGAGGATGATGCTGTCAACATTATAAAGCTGGAGGATGAAAGGGAGTTTTTGGTTGACCTTATGGCTGCTCCTGGTACACTTATTCCAACTGATATTTTTAATCTTAGCGACCCGTCATTTAAGCCATACAATCCCAAGAATTTTTCAACCTTACAATCCACAAATGAAAGTAGATTTTCTTACCCAAGGCCTATGTCATCTGATGGTGAAGGCAGTAGTCAAAGCTCTGCTATCAGAAATGATTCATCATCATCTAATGTAAGACCGCATTTTGGAAAGTCTGATTATATGTCTTCAGACTTGAGTTTGGGTGGAGGAACTGGTGTTGGTCCCTCCAAAGTTCCTGGTAAAGCAACTTCCAGCCAACTGGACAATTTTCTTTCATCAGCTAGTAGTTCGCTGTACAAAGGAACTCGTGGAATGAATGCTATTGGTGATGGGACTAGACTGAATGTCAATGTTGTACCATATGGTCAGAACGGTCCAGATGACTCTAGGAACCTCTTTGCAGATCTTAACCCATTCCAGATAAAAGGAACGGGCAAGTTTGCTGCCGTACATAACAAACCTGTGGAAAACAAAGCTCCTGAACTTCAAAGTGTTCAAGAAAAAAATAATTTTTCTGGTCGGCCCCCGGTGCCTTTGATGTGGAAGAACCGGTATGCTTACAATGAAGTTCCCAGGAAACCTAACCGTAATCCTAATGAATATAACCCTTCTTCATCTGCTTCCAATAGTTCTTCTGCAACAGAAAAAAATGATGTCAATAATTCCAACTCATCATACTATGCAAATATTAATAGAGATAAAGATCGGAGCTTGATGCAAGTTATTGGTTCAGTATCAACATCTGGTTCTGGTGGTCCGAACATGGTTGAAGATTTCAATGCTGAATGGAACAAAGGGAATGTGGAAAATTCTCACAATGACATAATAGATGATGTCAAAGAACGGGAAAACAATGAAATTGGATTTCATGACTGGGGTAAAAGCACTGATGATAGATTCGTGGGGAACAATTTGAAACTAAAAGAACCTGAGAGTCCTAGTTCATCAATTGATTCCATGAGAAACAGGGTTGACCAAATATTGGATGATGTTGATGTGGGCGAATGTGAAATACCATGGGAAGATCTGGTTCTTGGTGAAAGAATTGGTCTAGGTTCATATGGCGAGGTATATCAGGCTGACTGGAATGGCACTGAGGTTGCTGTGAAGAAGTTTTTGGATCAGGATTTTTCAGGTGCTGCCTTGGCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGACTGCGGCATCCTAATGTTGTTCTTTTTATGGGTGCCGTTACTCGACCTCCCAATCTCTCAATCATTACAGAGTTTCTTCCTAGGGGAAGCTTGTATCGAATTCTTCATCGTCCTAATTGTCAGATAGATGAGAAACGTAGGATTAAAATGGCTCTGGACGTGGCAAGGGGGATGAATTGTTTGCACACCAGCACACCTACAATTGTTCACCGTGATCTGAAGTCACCAAATCTTTTGGTTGATAACAACTGGAATGTAAAGGTTTGTGATTTTGGGCTGTCACGATTGAAGCACAATACATTTTTATCATCCAAGTCGACTGCTGGAACGCCTGAATGGATGGCTCCTGAAGTTCTTCGCAATGAGCCCTCAAATGAGAAGTGTGATGTATACAGTTTTGGAGTCATTCTATGGGAGCTTGCTACTCTAAAGTTGCCGTGGAGTGGGATGAATCCTATGCAAGTTGTTGGTGCTGTAGGTTTCCAAAATCGTCGTTTAGATATCCCCAAAGAAGTTGATCCTTTAGTTGCAAGAATTATCTGGCAATGTTGGCAACAGGATCCAAATTCGCGACCCTCATTTGCACAGCTTGCAGGATTGCTTAAGCCCTTGCAGCGTTTAGTTATTCCATCTCATCAAGACCAGCCAGCTTCACCTTTGGCGCAGGAGATTTCTGTAAATTCTACCCCTTGA 2883 0.4325 MKNIFKKLHKGSNHDPNRSNESPASASVASPSGASDQRTSPLQNTATSPSSPSSLSPPTSATPATQPSPATPNRQDYFSSEEEYQVQLALAISASKSDFRDDPEKDQIRAATLLSLGGHRTDSARNNDVARTLSRQYWEYSVLDYEEKVVDGFYDVYGLSTDSSMQGKMPSLEDLEANAGDSSFEVVIVNQAVDPALEELVQITQCVALDCPVTDVGVLVQRLAELVTGHMGGPVKDANTILARWTERSTELRTSLQTSVLPIGSINVGLSRHRALLFKVLSDNIKMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPTDIFNLSDPSFKPYNPKNFSTLQSTNESRFSYPRPMSSDGEGSSQSSAIRNDSSSSNVRPHFGKSDYMSSDLSLGGGTGVGPSKVPGKATSSQLDNFLSSASSSLYKGTRGMNAIGDGTRLNVNVVPYGQNGPDDSRNLFADLNPFQIKGTGKFAAVHNKPVENKAPELQSVQEKNNFSGRPPVPLMWKNRYAYNEVPRKPNRNPNEYNPSSSASNSSSATEKNDVNNSNSSYYANINRDKDRSLMQVIGSVSTSGSGGPNMVEDFNAEWNKGNVENSHNDIIDDVKERENNEIGFHDWGKSTDDRFVGNNLKLKEPESPSSSIDSMRNRVDQILDDVDVGECEIPWEDLVLGERIGLGSYGEVYQADWNGTEVAVKKFLDQDFSGAALAEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIITEFLPRGSLYRILHRPNCQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDNNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWSGMNPMQVVGAVGFQNRRLDIPKEVDPLVARIIWQCWQQDPNSRPSFAQLAGLLKPLQRLVIPSHQDQPASPLAQEISVNSTP 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0109 960 ProSitePatterns Protein kinases ATP-binding region signature. 685 707 IPR017441 GO:0005524
Mibi02g0109 960 MobiDBLite consensus disorder prediction 17 76 - -
Mibi02g0109 960 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Mibi02g0109 960 MobiDBLite consensus disorder prediction 346 421 - -
Mibi02g0109 960 MobiDBLite consensus disorder prediction 494 563 - -
Mibi02g0109 960 FunFam Serine/threonine-protein kinase isoform 1 670 757 - -
Mibi02g0109 960 PRINTS Tyrosine kinase catalytic domain signature 792 810 IPR001245 GO:0004672|GO:0006468
Mibi02g0109 960 PRINTS Tyrosine kinase catalytic domain signature 858 880 IPR001245 GO:0004672|GO:0006468
Mibi02g0109 960 PRINTS Tyrosine kinase catalytic domain signature 902 924 IPR001245 GO:0004672|GO:0006468
Mibi02g0109 960 PRINTS Tyrosine kinase catalytic domain signature 753 766 IPR001245 GO:0004672|GO:0006468
Mibi02g0109 960 PRINTS Tyrosine kinase catalytic domain signature 839 849 IPR001245 GO:0004672|GO:0006468
Mibi02g0109 960 SUPERFAMILY Protein kinase-like (PK-like) 663 928 IPR011009 -
Mibi02g0109 960 FunFam Serine/threonine-protein kinase CTR1 758 941 - -
Mibi02g0109 960 Gene3D Phosphorylase Kinase; domain 1 672 756 - -
Mibi02g0109 960 Pfam Protein tyrosine and serine/threonine kinase 680 929 IPR001245 GO:0004672|GO:0006468
Mibi02g0109 960 MobiDBLite consensus disorder prediction 1 76 - -
Mibi02g0109 960 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 48 935 - -
Mibi02g0109 960 MobiDBLite consensus disorder prediction 346 392 - -
Mibi02g0109 960 CDD STKc_MAP3K-like 685 931 - -
Mibi02g0109 960 Gene3D Transferase(Phosphotransferase) domain 1 758 940 - -
Mibi02g0109 960 ProSiteProfiles Protein kinase domain profile. 679 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0109 960 Pfam Ethylene-responsive protein kinase Le-CTR1 130 328 - -
Mibi02g0109 960 MobiDBLite consensus disorder prediction 531 563 - -
Mibi02g0109 960 SMART serkin_6 679 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0109 Mibi-ChrMibi02 1272116 1280460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0109 1 915 MAP Kinase Kinase Kinase AT1G08720 58.068 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mibi02g0109 PK_Tyr_Ser-Thr 2.8e-64 CL0016