LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi02g0101	ATGAATAATATTTACCAAGAGGTGGCACGAGGCCAGTCCCACTCGACTCAACCCAACAAACCATTCTCTCTCATGGCATCCGACCAACACGACACCGTTTTCCCTGAAGAGGAGCTCGACGACGATGACGACGAATCTCAAGAGGACGAAGAAGAAGAAGACGACGACGACGACGTTCTCCCTGAACCTCAAGACCACCATCAACATCCCCACGTTCCTTCTACCCTCCCCCTTCCTTCCCCCACCGTCACCGTCGCCGTCCCCGCCTCCTCCGTCTCCAACGGCGCTCCCACCCCCATCTCCGTCTCCGCCGCCACCACAATTGTCACCACCGTTGATCCCAAGCGCCACCGGATCGACGCCGTCGATGAGAAAAAGCCTCTCGACGATTCACGCAGACTTTTTCAACGCCTTTGGACCGATGAGGACGAGATCGAGCTCCTGCAGGGATTCCTCGACTACACCGCACAGCGAGGTTCCTCCCACCACAACGATACCGCCCTGTTTTACGACCAAATCAAGTCCAAGCTTCAGCTCGACTTCAACAAGAACCAGCTTGTCGAGAAGCTCCGAAGGCTCAAGAAGAAATACCGCAATGTTCTGAATAAGATCAGCGCCGGCAAGGAATTGTCCTTCAAGAGCCCCCACGATCAGGCTACCTTCGAAATTTCCCGTAAGATCTGGAGCAATTTGGGCTCTACCGGCGCAGATAACGCCTTGGACGACGACGAAATCAGCCCCAACCCTAACCCTAACCCTAATTTTAGCCACTCACTGCCTAAGACCGAGGTCATAATCGGGATCCCTGCGGAGAAGCGAACGCCACCGTCCCGGAAGCGTTCGCGGTCTCGATCTGGGATCAGAACCGATGAGAAGCGCGACTTGAATGACGGATTGGCGCCGAACAGGGATAATTATTGTATTAGTAATAATAATGCTAATGCTAATAATGACAATAGTCATAGCAATAACCATACCGCTATACCGGGCTTGATTGAGGAGACGGTGAGGAGTTGCCTGTCGCCCTTGTTGAAGGAGATGATGAGTGGTGCCATGGGTGGGCCATTTGGGGCGAGGGGGTTTGGAGGATTGGCACTAAATCCTATGCCATTGAGCTTCGGTGTGCCATCCTTCATGATGAACTACGGCAGCGGAGAAACGGTAGATGACAAGTGGAGGAAGCAACAAATTCTGGAGTTGGAGGTCTACTCGAAGCGGCTTGAGTTGGTGCAGGATCAGATCAAGGCTGCGTTGGAGGACTTGAGATCCACTGGACGATGA	1281	0.534	MNNIYQEVARGQSHSTQPNKPFSLMASDQHDTVFPEEELDDDDDESQEDEEEEDDDDDVLPEPQDHHQHPHVPSTLPLPSPTVTVAVPASSVSNGAPTPISVSAATTIVTTVDPKRHRIDAVDEKKPLDDSRRLFQRLWTDEDEIELLQGFLDYTAQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLNKISAGKELSFKSPHDQATFEISRKIWSNLGSTGADNALDDDEISPNPNPNPNFSHSLPKTEVIIGIPAEKRTPPSRKRSRSRSGIRTDEKRDLNDGLAPNRDNYCISNNNANANNDNSHSNNHTAIPGLIEETVRSCLSPLLKEMMSGAMGGPFGARGFGGLALNPMPLSFGVPSFMMNYGSGETVDDKWRKQQILELEVYSKRLELVQDQIKAALEDLRSTGR	426

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi02g0101	426	Coils	Coil	183	203	-	-
	Mibi02g0101	426	MobiDBLite	consensus disorder prediction	283	299	-	-
	Mibi02g0101	426	MobiDBLite	consensus disorder prediction	1	83	-	-
	Mibi02g0101	426	MobiDBLite	consensus disorder prediction	34	60	-	-
	Mibi02g0101	426	MobiDBLite	consensus disorder prediction	245	259	-	-
	Mibi02g0101	426	MobiDBLite	consensus disorder prediction	238	303	-	-
	Mibi02g0101	426	Coils	Coil	400	420	-	-
	Mibi02g0101	426	Pfam	Protein of unknown function, DUF573	135	229	IPR007592	GO:0006355
	Mibi02g0101	426	MobiDBLite	consensus disorder prediction	1	26	-	-
	Mibi02g0101	426	PANTHER	BNAANNG10740D PROTEIN-RELATED	27	419	IPR007592	GO:0006355

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi02g0101	Mibi-ChrMibi02	1199089	1202051	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi02g0101	25	423	GeBP Transcription Factor Family	AT5G28040	45.824	1.92e-98	299

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GeBP	Mibi02g0101		DUF573	5.3e-35	CL0123

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