Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0093 ATGGAGCAGTATGAAATACTCGAGCAAATTGGAAAAGGTGCTTTTGGTTCTGCTCTTCTTGTGAGGCATAAGCACGAGAAGAAGAAATATGTTCTGAAGAAGATCCGTTTGGCCCGCCAAACTGAGCGATCTCGGAGATCTGCACACCAGGAGATGGAGCTGATCTCTAAATTCAGAAATCCATTTATTGTGGAATATAAAGATTCATGGGTAGAGAAGGGTTGCTATGTGTGCATTATCATTGGTTACTGTGAGGGAGGAGATATGGCGGAAGCTATAAAAAAAGCAAATGGCAATCTTTTTCCAGAGGAGAAACTTTGCAAGTGGCTTGTTCAACTTCTTATGGCACTTGATTACTTGCACATGAACCATATTCTTCACCGGGATGTCAAGCAGTGTTCAAATATATTTTTGACAAAAGATAAAGACATACGCCTTGGTGATTTTGGACTTGCCAAAATGTTGACTTCAGATGATCTTGCTTCTTCTGTTGTGGGAACACCCAGCTATATGTGCCCTGAGCTCCTTGCTGATATTCCTTACGGTTCTAAATCAGATATTTGGTCTTTGGGATGTTGTGTATATGAAATGACAGCACATAAGCCCGCTTTTAAAGCATTTGATATACAAGCACTGATAAACAAGATAAACAAGTCCATAGTGGCCCCACTGCCAACAAAGTATTCTGGTGCATTTCGAGGTCTCGTTAAAAGCATGCTGCGGAAAAATCCAGAGCTTAGACCTAGTGCCGCAGAGCTTCTTGGGCACCCTCATCTTCAGCCTTATATTCTCAAGATCCATCTTAAAATCAATAACCCCAGACGAAGTACACTACCAGCCAATTGGCCTGACAAGTACCTGAAGAAAACTAGATTTGTTGAGCCAGGAGATTATCCTACTTCCACCTACAGGAATAAGCGGAATTCTTTCAAAAATGACCGGACTTTGAATCCTAGCATATCCGGAGCTGAGCAAGATTCTATATGCTCTACCTTAGAAATAGATTGTGCTACAGAGCATTTGAATAACCGGTTAGCAGAACTGTGCATTGGGGATACCCCTGAAGTGAACAAAATCCGTAAGCCAGGAGTTTCCAGGAGTTCAAGCATTTCCAGAACTCCAAGAGTGACACCATCAAAAGCTTCTGCCTGTCCTAAGAAACAAATGGAGTTTTCAAAGAATCTTGAGCTGGTAAGACATAATGGAAGTTTGCTGCATCCAATTTCACACAATGCCAGAAAATCTCTCCATACAACTCGTAGAGCATCATTTCCATTGCCAAAAAGAGGTGCTGCTGTTCTTGGTCAAACAAAATCACCTCATATTTCAGTCAACTCTCCCCGAATTGACAGGATGGCTGAATTCCCATTAACATCATTTGAGAGTCCTCTGTTTCCTGTTAATAGAACTTCATCAACCTCTGCACAGGGTTCCTCAGTCTCCCCACCTTGTGGTGATATTTCAATTACAAAGGATAAATGCACTGTTCAGGTATCTAATAGAGCTGCTGTCAAGGCTAGTTTGACAGATGCTTTGCAGAGAACCAAATGCAACATGTGTCAGGAAAATGATGAGGTGAAAAGTGGATCCTCCGATCAAAATGCAACTGCTGGCGCATCAAGCCATACCTCTTCAGACTGGCACCGCCGGCATTTTGACACTTCATCATACCAACAAAGAGCTGAAGCCTTGGAAGGATTGCTCGAATTCAGTGCAAGGTTGCTGCAACAGGAAAGGTATCAAGAACTTGGGGTCTTGTTGAAACCCTTTGGACCTGGGAAGGTCTCTCCACGTGAAACTGCTATCTGGTTGAGTAAAAGCTTCAAAGAAAACACTCAACCGTGA 1845 0.426 MEQYEILEQIGKGAFGSALLVRHKHEKKKYVLKKIRLARQTERSRRSAHQEMELISKFRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGNLFPEEKLCKWLVQLLMALDYLHMNHILHRDVKQCSNIFLTKDKDIRLGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMTAHKPAFKAFDIQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLGHPHLQPYILKIHLKINNPRRSTLPANWPDKYLKKTRFVEPGDYPTSTYRNKRNSFKNDRTLNPSISGAEQDSICSTLEIDCATEHLNNRLAELCIGDTPEVNKIRKPGVSRSSSISRTPRVTPSKASACPKKQMEFSKNLELVRHNGSLLHPISHNARKSLHTTRRASFPLPKRGAAVLGQTKSPHISVNSPRIDRMAEFPLTSFESPLFPVNRTSSTSAQGSSVSPPCGDISITKDKCTVQVSNRAAVKASLTDALQRTKCNMCQENDEVKSGSSDQNATAGASSHTSSDWHRRHFDTSSYQQRAEALEGLLEFSARLLQQERYQELGVLLKPFGPGKVSPRETAIWLSKSFKENTQP 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0093 614 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Mibi02g0093 614 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 569 - -
Mibi02g0093 614 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Mibi02g0093 614 CDD STKc_Nek 3 259 - -
Mibi02g0093 614 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Mibi02g0093 614 ProSiteProfiles Protein kinase domain profile. 4 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0093 614 MobiDBLite consensus disorder prediction 360 384 - -
Mibi02g0093 614 SUPERFAMILY Protein kinase-like (PK-like) 1 299 IPR011009 -
Mibi02g0093 614 MobiDBLite consensus disorder prediction 524 550 - -
Mibi02g0093 614 FunFam Serine/threonine-protein kinase Nek2 84 275 - -
Mibi02g0093 614 MobiDBLite consensus disorder prediction 301 317 - -
Mibi02g0093 614 MobiDBLite consensus disorder prediction 362 378 - -
Mibi02g0093 614 Gene3D Transferase(Phosphotransferase) domain 1 84 273 - -
Mibi02g0093 614 MobiDBLite consensus disorder prediction 524 543 - -
Mibi02g0093 614 MobiDBLite consensus disorder prediction 298 317 - -
Mibi02g0093 614 Pfam Protein kinase domain 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0093 Mibi-ChrMibi02 1101974 1106225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0093 10 260 MAP Kinase Kinase Kinase AT1G53570 31.250 8.77e-35 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Mibi02g0093 Pkinase 1.2e-61 CL0016