Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0082 ATGGCCTCGGAGGGATTGGGTGACGATTTCCTGGAGCAGATCTTGGCTGTTCCCTCTTCTGCTAATTACCCCATCTCTCCTCCTCCTAATCCTATGGCGCTCCACTTAGGCATGCCTTTGGGCTTGAATCTTGAGCAAGCCTTTCTCCCACAAGATGACCCCATCAATCACCATCTCCATCTCCATCTTCACAATTCCACCACCACTTCTGCCTCTCCTCTCTCTGATAGGGAATCCGTGCAGAGGACACCTGGCTTGTTTTCGCCCTTTGGACCTTTGCATCTTCGCCCCACCACGCTGCCATCCCCGCCACCTCCTCCCTCTCAACTTCCCAATCGTCAGCCATTTCGTAGCCAACCACAAAATCCGGGGCCTGCTGCTACTGGGCCTCAGCCACCTGCCATCCGCCCTAGAGTGCGAGCAAGAAGAGGGCAAGCCACTGATCCCCATAGTATTGCTGAACGGTTGCGCCGTGAAAGAATTGCTGATAGAATGAAGGCTTTGCAGGAATTAGTTCCCAGCGCCAACAAGACGGACAGAGCCGCGATGCTTGATGAAATTGTGGATTACGTGAAGTTTCTCAGACTCCAGGTTAAGGTGCTTAGCATGAGTAGACTTGGTGGAGCTGGTGCTGTGGCTCAGCTTGTAGCAGATGTTCCTTTGTCTGCAGTAGTGGAGCGGGCGGTAAATTTCTCCACCTTCCACTTTAAATGTCGACTTATTCTTACCTCGTCATTCTACCTGTCCTTAATTTTGTCAAAAACCACGCTTACACCGGCACGCCCGGGGACCACCTGCACCAGCCCATGTAAGGAAATACAGGAGATTGTGCATATAGTACATGGTGAGAGGGGTGAGGACGGAGGGAATCAAGCAGCGTGGGAAAAGTGGTCGAATGATGGCACAGAACAAGAGGTGGCAAAACTGATGGAACAGGACGTGGGAGCTGCCATGCAATTCCTTCAGTCCAAGGCACTCTGCATCATGCCCATTTCCTTGGCTTCTGCCATTTTTCGTACCTCCCACTCCGATGCTTCGACTCTCACCAAGCCCGAACCAAACAGCCATTCCTAG 1074 0.5233 MASEGLGDDFLEQILAVPSSANYPISPPPNPMALHLGMPLGLNLEQAFLPQDDPINHHLHLHLHNSTTTSASPLSDRESVQRTPGLFSPFGPLHLRPTTLPSPPPPPSQLPNRQPFRSQPQNPGPAATGPQPPAIRPRVRARRGQATDPHSIAERLRRERIADRMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSAVVERAVNFSTFHFKCRLILTSSFYLSLILSKTTLTPARPGTTCTSPCKEIQEIVHIVHGERGEDGGNQAAWEKWSNDGTEQEVAKLMEQDVGAAMQFLQSKALCIMPISLASAIFRTSHSDASTLTKPEPNSHS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0082 357 Pfam Helix-loop-helix DNA-binding domain 150 194 IPR011598 GO:0046983
Mibi02g0082 357 MobiDBLite consensus disorder prediction 96 113 - -
Mibi02g0082 357 SMART finulus 151 200 IPR011598 GO:0046983
Mibi02g0082 357 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 145 194 IPR011598 GO:0046983
Mibi02g0082 357 FunFam Transcription factor bHLH66 142 207 - -
Mibi02g0082 357 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 204 IPR036638 GO:0046983
Mibi02g0082 357 MobiDBLite consensus disorder prediction 67 82 - -
Mibi02g0082 357 MobiDBLite consensus disorder prediction 67 151 - -
Mibi02g0082 357 Gene3D - 140 202 IPR036638 GO:0046983
Mibi02g0082 357 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 79 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0082 Mibi-ChrMibi02 1025453 1028800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0082 116 354 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 56.667 2.35e-69 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi02g0082 HLH 4.7e-08 No_clan