Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0079 ATGGCGGAAGAAGCGAAGGCGAAAGGTAATGCAGCTTTCTCATGCGGCGATTTCGAGGCGGCCATCCGGCACTTCTCGGACGCCATCTCTCTCTCCCCAACCAACCACGTGCTCTACTCCAATCGATCCGCCGCCTACGCCTCCCTTCACAATTACTCCGAAGCCCTAGCGGATGCCAAGAAGACCGTCGACCTCAGGCCCGATTGGTCCAAGGGCTACAGCCGCCTCGGCGCCGCCCATCTCGGCCTCGGCCATCACCACGACGCCATTGCTGCTTACCAGAAGGGCCTCGCCATCGACCCCAACAACGAACCGCTCAAATCCGGTTTGGCTGATGCCCGGGCCGCCTCTTCTAGGTCTCGTTCCATGGGTAATCCCTTCGGCGACGCTTTCTCTGGGCCCGACATGTGGGCCAGGCTCACTGCTGATCCCACCACCAGAGCCTATCTGCAGCAGCCTGATTTCCTCACCATGATGCAGGACATCCAGAAGAATCCCAACAGTCTCAATTTGTACATGAAAGACCCGAGAATCATGCAGGCCCTTGGGGTTTTGCTCAACCTTAAGATTCGCACCCCCGACGAGGACACCGATATGCCCGAGGCTTCTTCCCCTTCGTCTCCGCCTCCGCCTCCGCCTCCGCCAGCAGCAGAGAGGAAGAGAGCTGCTCAAGCTGAACCTGCGAAGGAAGAGAGGCGGCCCGGGCCCGGGCCTGAGCCCGTCGAGAAGGGAGCCAAGGATAGGAAGTCTCAGGCTCACAGGGAGAAGGAGGCAGGCAATGCGGCTTACAAGAAGAAGGATTTTCATACTGCTATCCAGCATTACTCTAAGGCTATGGAACTGGATGATGATGATATATCATATCTCACAAACCGTGCTGCTGTTTACTTGGAAATGGGAAAGTTAGAAGAATGCATAAACGATTGTGACAAGGCTGTAGAAAGGGGAAGAGAATTGAGATCAGACTTTAAGATGATAGCAAGAGCTTTGACAAGGAAGGGAACTGCCCTTGCGAAAATGGCAAAATGCTCAAAGGATTACGAACCTGCCATTGAGACTTTCCAAAAGGCACTTACAGAGCATCGTAACCCTGACACCTTAAAGAAATTGAATGACGCTGAAAAAGCTAAGAAAGAACTTGAACAGCAAGAATACTTTGATCCAAAATTGGCTGATGAGGAACGTGAAAAAGGCAATGATTTCTTTAAGCAACAAAAGTATCCCGAAGCTGTGAAGCATTACACCGAGTCTTTAAGAAGAAATCCTAAGGATCCTAGGACTTACAGTAACAGAGCTGCTTGCTACACAAAACTTGGGGCAATGCCTGAGGGTTTGAAGGATGCAGACAAATGCATTGAGTTAGATCCAACTTTTGTGAAGGGTTATACTAGAAAAGGTGCTATACAGTTTTTCATGAAAGAATATGACAAAGCTTTGGAAACGTATCAGGAAGGGCTGAAACATGATTCAAACAACCAGGAGATGCTTGATGGCATAAGAAGATGTGTAGAACAAATTAACAAGGCCAGCCGTGGAGATATAAGTCCTGAGGAGTTGAAGGAGAGACAGGCCAAGGCAATGCAGGACCCTGAGATACAGAACATCCTCCAAGACCCTATTATGAGACAGGTGTTGGTTGATTTTCAGGAAAATCCAAAGGCTGCCCAGGAGCATACGAAGAATCCAATGGTGATGAACAAGATCCAGAAGCTGGTCAGTGCTGGAATTGTCCAGCTTAAATAA 1743 0.4991 MAEEAKAKGNAAFSCGDFEAAIRHFSDAISLSPTNHVLYSNRSAAYASLHNYSEALADAKKTVDLRPDWSKGYSRLGAAHLGLGHHHDAIAAYQKGLAIDPNNEPLKSGLADARAASSRSRSMGNPFGDAFSGPDMWARLTADPTTRAYLQQPDFLTMMQDIQKNPNSLNLYMKDPRIMQALGVLLNLKIRTPDEDTDMPEASSPSSPPPPPPPPAAERKRAAQAEPAKEERRPGPGPEPVEKGAKDRKSQAHREKEAGNAAYKKKDFHTAIQHYSKAMELDDDDISYLTNRAAVYLEMGKLEECINDCDKAVERGRELRSDFKMIARALTRKGTALAKMAKCSKDYEPAIETFQKALTEHRNPDTLKKLNDAEKAKKELEQQEYFDPKLADEEREKGNDFFKQQKYPEAVKHYTESLRRNPKDPRTYSNRAACYTKLGAMPEGLKDADKCIELDPTFVKGYTRKGAIQFFMKEYDKALETYQEGLKHDSNNQEMLDGIRRCVEQINKASRGDISPEELKERQAKAMQDPEIQNILQDPIMRQVLVDFQENPKAAQEHTKNPMVMNKIQKLVSAGIVQLK 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0079 580 MobiDBLite consensus disorder prediction 203 218 - -
Mibi02g0079 580 FunFam Stress-induced phosphoprotein 1 249 383 - -
Mibi02g0079 580 Gene3D Tetratricopeptide repeat domain 1 115 IPR011990 GO:0005515
Mibi02g0079 580 ProSiteProfiles TPR repeat profile. 391 424 IPR019734 GO:0005515
Mibi02g0079 580 SUPERFAMILY TPR-like 390 503 IPR011990 GO:0005515
Mibi02g0079 580 ProSiteProfiles TPR repeat profile. 70 103 IPR019734 GO:0005515
Mibi02g0079 580 FunFam hsp70-Hsp90 organizing protein 3-like 390 504 - -
Mibi02g0079 580 Pfam Tetratricopeptide repeat 71 103 IPR001440 GO:0005515
Mibi02g0079 580 Pfam Tetratricopeptide repeat 460 492 IPR001440 GO:0005515
Mibi02g0079 580 Pfam TPR repeat 259 300 - -
Mibi02g0079 580 Pfam TPR repeat 398 439 - -
Mibi02g0079 580 SMART tpr_5 286 319 IPR019734 GO:0005515
Mibi02g0079 580 SMART tpr_5 36 69 IPR019734 GO:0005515
Mibi02g0079 580 SMART tpr_5 252 285 IPR019734 GO:0005515
Mibi02g0079 580 SMART tpr_5 2 35 IPR019734 GO:0005515
Mibi02g0079 580 SMART tpr_5 70 103 IPR019734 GO:0005515
Mibi02g0079 580 SMART tpr_5 425 458 IPR019734 GO:0005515
Mibi02g0079 580 SMART tpr_5 327 364 IPR019734 GO:0005515
Mibi02g0079 580 SMART tpr_5 391 424 IPR019734 GO:0005515
Mibi02g0079 580 SMART tpr_5 459 492 IPR019734 GO:0005515
Mibi02g0079 580 Coils Coil 363 383 - -
Mibi02g0079 580 FunFam Stress-induced phosphoprotein 1 1 116 - -
Mibi02g0079 580 ProSiteProfiles TPR repeat profile. 252 285 IPR019734 GO:0005515
Mibi02g0079 580 Gene3D Tetratricopeptide repeat domain 390 510 IPR011990 GO:0005515
Mibi02g0079 580 Pfam Tetratricopeptide repeat 8 35 IPR019734 GO:0005515
Mibi02g0079 580 SUPERFAMILY TPR-like 1 113 IPR011990 GO:0005515
Mibi02g0079 580 SUPERFAMILY TPR-like 250 379 IPR011990 GO:0005515
Mibi02g0079 580 FunFam Stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing) 512 580 - -
Mibi02g0079 580 PANTHER TPR REPEAT CONTAINING PROTEIN 2 552 IPR045248 -
Mibi02g0079 580 MobiDBLite consensus disorder prediction 194 263 - -
Mibi02g0079 580 SMART CBM 143 182 IPR006636 -
Mibi02g0079 580 SMART CBM 529 568 IPR006636 -
Mibi02g0079 580 Gene3D - 124 190 - -
Mibi02g0079 580 Gene3D Tetratricopeptide repeat domain 249 385 IPR011990 GO:0005515
Mibi02g0079 580 ProSiteProfiles TPR repeat profile. 459 492 IPR019734 GO:0005515
Mibi02g0079 580 Gene3D - 511 579 - -
Mibi02g0079 580 FunFam Putative stress-induced-phosphoprotein 1 123 191 - -
Mibi02g0079 580 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Mibi02g0079 580 MobiDBLite consensus disorder prediction 222 263 - -
Mibi02g0079 580 Pfam STI1 domain 134 187 IPR041243 -
Mibi02g0079 580 Pfam STI1 domain 521 572 IPR041243 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0079 Mibi-ChrMibi02 1016617 1019123 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0079 390 486 U-box Gene Family AT3G07370 28.866 1.53e-07 51.2