Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0077 ATGACGACAGGGGCGGAGGGTGATAATGATAAGTACAGCATGATTAATTTCGAAGAGACAGAGTTACGACTGGGATTGCCCGGCGCTTCTTCCTCTGCTCTCAAGACCACCTGCTGTGCCGGCTGCGGCAAGGGCAAGAGGGGCTTCTCCCACGACACCTCCTTCGATTTGAAGCTCAATCTTTCTACCCACAACACCACTGCTGCTGCTTCTCCCTCCAAGCCACCCGCCAAGGCACAAGTGGTGGGGTGGCCGCCGGTGAGGTCATCGAGGAAGAACATAGGGACAGGGCAGAGCCAACAGAAGAAGGAGGAGGAGGAGGAGGAAGGAGGGGCGTTTGTGAAGGTGAGCATGGACGGGGCGCCATATCTTAGGAAAGTGGACTTAAAACAGTACAAGAGCTACCAAGAGCTGTCGCAGGGGCTGGCTAAAATGTTCAGCTCATTCACCAACAACGACGCCACTCCTCAGGCCACCAAGGACTTCCTCAACGAGAGCAAACTTATCGACCTCTTGACAGGTTCCGACTACGTCCCCACTTATGAGGACAAGGACTCCGATTGGATGCTCGTCGGCGACGTTCCCTGGGAAATGTTCGTGCAATCCTGCAAACGCCTCCGCATCATGAAAGGTTCCGACGCTATTGGCCTTGCGCCAAGGGCTGTGGAAAAGTGCAAGAACAGAAGCTGA 690 0.5493 MTTGAEGDNDKYSMINFEETELRLGLPGASSSALKTTCCAGCGKGKRGFSHDTSFDLKLNLSTHNTTAAASPSKPPAKAQVVGWPPVRSSRKNIGTGQSQQKKEEEEEEGGAFVKVSMDGAPYLRKVDLKQYKSYQELSQGLAKMFSSFTNNDATPQATKDFLNESKLIDLLTGSDYVPTYEDKDSDWMLVGDVPWEMFVQSCKRLRIMKGSDAIGLAPRAVEKCKNRS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0077 229 Pfam AUX/IAA family 44 220 IPR033389 -
Mibi02g0077 229 SUPERFAMILY CAD & PB1 domains 107 210 - -
Mibi02g0077 229 MobiDBLite consensus disorder prediction 66 111 - -
Mibi02g0077 229 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 16 216 IPR003311 GO:0005634|GO:0006355
Mibi02g0077 229 ProSiteProfiles PB1 domain profile. 111 211 IPR000270 GO:0005515
Mibi02g0077 229 FunFam Auxin-responsive protein 106 221 - -
Mibi02g0077 229 Gene3D - 105 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0077 Mibi-ChrMibi02 1001216 1003156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0077 125 209 B3 DNA Binding Superfamily AT1G19220 35.294 8.50e-09 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi02g0077 AUX_IAA 2.2e-76 CL0072