Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0074 ATGGCGAGCCAGGTGGTCAAAGTGAAGAGGCAGACGCTAGAGGCATGCATGACATGCCCTCTCTGTCTTAAACTGTTGAAGGACGCTACTACCATCTCTCTCTGCCTTCATACGTTCTGCAGGAAATGCATATATGAGAGATTCTCAGATGAGGAGGCGGATTGCTGTCCAGTATGCAATATTGATTTAGGCTGTCTTCCGGTGGAAAAGCTGAGGCCAGATCACAATTTGCAAGATATTAGAGCCAAAATATTCCCTTTAAGACGAAGAAAGATTAAGGCCCCGGAGGCAATACCTTCAGTACCTCTGCCAGCAAAAAGGAAGGAAAGATCACTTTCATCATTGGTGATTTCTGCTCCTAAAGTTACAATGCAGACTGGCTTCACGGGTAAGAGAACAAAAACTGGTACAAGAAAGGCTGCTGCTTTACGCGGATGCAATTTTGCTGTTCATGAATCCATAAAGAAAGAAGAAGTCTATACTGAGGATAACCCAGATTCTTCTACGACTGGGCCTTCTAAGAAGAATAGGCCTAATGAATATACAGAGAACAATGTGAAACTTCCAGAAGGTAAAGTTGATCTCTGGACACCCTTGAACTGTCTTGTTGAAGCTGCCAACAGGACAAAATCCTCAAAGTTGACTTCGCAAGGCTTGTCTGTTGCCAAAACGGAGCCTCCAACCACTCCTAATGGTGGGATAAGCATGCCTGAAATTACAACCAAATCAGAGCCACCTGCCACTGCCCATAGTGAATTACGCATTCCTAAAACCAAAAATAAGGATAATGGTCATAAAGCAAAATTTGGTGATGACAAGGATCAAAATGCTGTGCCTCCAGGACAAGTGAAGCGGAGAAAGGTGCGTCCAGCTGGTCAGAAAAGAAATGCAGCATCTGAGACTTCTACCTCAGCCCAAGGTATGCTAGATGCAGCTGGGGGCAGGTGTAACAGAGAAAACTGTCCTATTTGGTTTTCATTGGTTGCTTCAGAAGGCCAGAAAGGAGATGTTCCCTTGCCGCAGATTTCAGCATGCTACTTAAGAATAAAGGATAGTACTGTGCCCGTCTCCTTTATTCAAAAGTACCTTGTTAAGAAACTTAATCTTGCCAGCGAAGCAGAGGTGGAAATAATGTGCCATGGTCGACCGGTGCTGCCATCTTTGCAACTGCATAACTTGGTCGATCTCTGGTTCAGGACTGCTTCGTCCTCTAAAAAGCTTCCTGCTTCTGTTGGCTCTTCAGCCAAGGACTTCGTTATGGTTTTATCATATTCTCTGAAGGCCCTCCCTCCTTAG 1296 0.4491 MASQVVKVKRQTLEACMTCPLCLKLLKDATTISLCLHTFCRKCIYERFSDEEADCCPVCNIDLGCLPVEKLRPDHNLQDIRAKIFPLRRRKIKAPEAIPSVPLPAKRKERSLSSLVISAPKVTMQTGFTGKRTKTGTRKAAALRGCNFAVHESIKKEEVYTEDNPDSSTTGPSKKNRPNEYTENNVKLPEGKVDLWTPLNCLVEAANRTKSSKLTSQGLSVAKTEPPTTPNGGISMPEITTKSEPPATAHSELRIPKTKNKDNGHKAKFGDDKDQNAVPPGQVKRRKVRPAGQKRNAASETSTSAQGMLDAAGGRCNRENCPIWFSLVASEGQKGDVPLPQISACYLRIKDSTVPVSFIQKYLVKKLNLASEAEVEIMCHGRPVLPSLQLHNLVDLWFRTASSSKKLPASVGSSAKDFVMVLSYSLKALPP 431
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0074 431 ProSiteProfiles Zinc finger RING-type profile. 19 60 IPR001841 -
Mibi02g0074 431 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 1 427 IPR044807 GO:0004842
Mibi02g0074 431 MobiDBLite consensus disorder prediction 210 311 - -
Mibi02g0074 431 MobiDBLite consensus disorder prediction 210 247 - -
Mibi02g0074 431 MobiDBLite consensus disorder prediction 164 183 - -
Mibi02g0074 431 ProSitePatterns Zinc finger RING-type signature. 35 44 IPR017907 -
Mibi02g0074 431 MobiDBLite consensus disorder prediction 157 186 - -
Mibi02g0074 431 SMART ring_2 19 59 IPR001841 -
Mibi02g0074 431 SUPERFAMILY RING/U-box 13 84 - -
Mibi02g0074 431 Gene3D - 309 408 - -
Mibi02g0074 431 Pfam Zinc finger, C3HC4 type (RING finger) 19 59 - -
Mibi02g0074 431 MobiDBLite consensus disorder prediction 254 273 - -
Mibi02g0074 431 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 111 IPR013083 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi02g0074 Mibi-ChrMibi02 970181 974513 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0074 5 350 C3H Transcription Factor Family AT2G30580 44.077 6.29e-86 264