Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0069 ATGGCCTTTTGTCTGCGTTCTCATTTGGTTAAAGAAAATCATATGATTGATTGGTCATTACATACTCTGGAGCATAGTTCAAGAATTTGCGGCGCAGACTATTTTCTGGGTTCTTTATTGTATTTGGTTTTTCGTAACAGAAGATTAGCACATGCTAAAGAAGTTCATCCTCGCTTTGTGATTCAAATGATCTTTGTTGAGCTTCAATTTTATCATTTTATTTCTAATAATTGGGAGAATAAGATGTCTCATAAGTCATCGGATTTGGTTTCTGAATCTGTCAATATCTCTCATAGATGCAATGCATGGCTTTTACACAACTCTAAGTCATCCAAATCAAATTCATCTCGACTTTATGCTATATGCAGTGTTATTTTCTTTTCCGCGATTTCTACGCTGGGGAAAAATATCCCCCCGCCCTTTATAAATTGGCATGGGCTGATAATTCTCCACCATATACGAATCGGTTATCAAGAGATCATCATCGTCATCGTCATCATGGCCACCTCCTCCGCCCAGCCTAAGTCCAAGAAACCCTCTGTTGCGAGGAAACCCAAATCCTCCCCCTCGCATCCTCCTTTTTCTCAGATGATAGCGGAGGCGATCGCAAGTCTGAAAGAGAGGACCGGTTCCAGCCAGCCTGCCATCGCTAAGTTCATCGAGCAGAAGCACAAGGGATTGAATCCCAATTACAAGAAGCTCTTGTCCACCAATTTGAAGAAGTCGGTGGCCGCTGGAAAGCTCGTCAAGGTCAAGAACTCCTACAAGCTTGCAGCAAAGACCGTGGCTCCTGCTGCTACCAAGCCCAAGAAATCAACCGCCAAGGCCGCACCCAAGTCTCAGCCTAAGCCCTCTGCTAAACCCAAAGTAGCCGCTAAGCCTAAAGCCGCTTCCAAACCCAAACCCAAACCCAAAGCTAAAGCGACCAAGGCGAAAACTACGAAAGTGACCTCACGGCCGGCTAAGGCACCCGCCAGGACCTCGCTAGGCAAGAGGGTGGCTAAGGCGGCACGGGTTGTGAAGAAGCCCAAGAGTGTGAAGTCGAAATCGCCAGCCAAGAAAGCGGCTGCCAAGAAGGCTAAGAAGTAG 1089 0.4646 MAFCLRSHLVKENHMIDWSLHTLEHSSRICGADYFLGSLLYLVFRNRRLAHAKEVHPRFVIQMIFVELQFYHFISNNWENKMSHKSSDLVSESVNISHRCNAWLLHNSKSSKSNSSRLYAICSVIFFSAISTLGKNIPPPFINWHGLIILHHIRIGYQEIIIVIVIMATSSAQPKSKKPSVARKPKSSPSHPPFSQMIAEAIASLKERTGSSQPAIAKFIEQKHKGLNPNYKKLLSTNLKKSVAAGKLVKVKNSYKLAAKTVAPAATKPKKSTAKAAPKSQPKPSAKPKVAAKPKAASKPKPKPKAKATKAKTTKVTSRPAKAPARTSLGKRVAKAARVVKKPKSVKSKSPAKKAAAKKAKK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0069 362 MobiDBLite consensus disorder prediction 175 194 - -
Mibi02g0069 362 CDD H15 188 270 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mibi02g0069 362 Pfam linker histone H1 and H5 family 191 257 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mibi02g0069 362 MobiDBLite consensus disorder prediction 335 362 - -
Mibi02g0069 362 Gene3D - 185 275 IPR036388 -
Mibi02g0069 362 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 190 259 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mibi02g0069 362 PANTHER HISTONE H1 171 357 - -
Mibi02g0069 362 SUPERFAMILY "Winged helix" DNA-binding domain 187 271 IPR036390 -
Mibi02g0069 362 PRINTS Histone H5 signature 341 360 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mibi02g0069 362 PRINTS Histone H5 signature 283 297 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mibi02g0069 362 PRINTS Histone H5 signature 177 198 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mibi02g0069 362 PRINTS Histone H5 signature 319 336 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mibi02g0069 362 PRINTS Histone H5 signature 204 221 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mibi02g0069 362 SMART h15plus2 188 254 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mibi02g0069 362 MobiDBLite consensus disorder prediction 262 362 - -
Mibi02g0069 362 MobiDBLite consensus disorder prediction 294 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0069 Mibi-ChrMibi02 945136 946909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0069 166 261 Single Myb Histone (SMH) Gene Family AT1G49950 38.542 5.74e-09 55.1