Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0056 ATGCAGCCCTTCACGTTATTATTCCACTGTTTCATTGGCCTCTCTCTTGTTTTTGCCGAGGGAGCTCAATCTGCATTTAGTGACGAATTGTCGACACTTCTCTCAATCAAATCCAGTCTCGTCGATCCAATGAGGCATCTGAAGGATTGGCAGCCACCGGCCAATCTGACCCGTGATGGTTCATGGTCACCCCACTGTAACTGGACCGGAGTTTGGTGCAACTCTAACGGCTTCATAGAGAGACTCGACCTCTCCAACATGAACCTTAGTGGTCGTGTTTCAGACCACATTCAAGAACTTTCAAGTCTTTCTTTTTTCAACATAAGTTGCAACAATTTCGCTTCTTCATTGCCAAAATCATTGTCCAATCTCACTTCCTTGAAGAGCTTTGATGTGAGCCAGAACTACTTCACTGGCAACTTTCCTATGGGTCTTGGGAGTGCCAAAGGATTGATATCAATTAACGCCTCAAGTAATAACTTTTTGGGTTTTCTTCCCGAGGATCTTGGTAATGCAACGTTGCTTGAAAGCATTGATTTTCGTGGAGGCTACCTTGAAGGTTCGATCCCCATTAGTTTCAAGAATTTACATAAGCTCAAATTTCTTGGGCTCTCAGGTAATAACTTTACAGGGAAGATTCCAGGAGAACTTGGAGAGCTTACTTCTCTAGAGACACTAATTCTTGGGTACAATGAGTTTGAAGGAGAGGTCCCTTCGGAGTTTGGCAATCTGACCAATCTTCAGTACCTAGACTTGGCTGTGGGAGGTCTCAGTGGACAGATTCCACCACAATTGGGTAGGTTGAAAAGCCTTAGCACACTTTTCTTGTACAGTAACAAGTTTGAAGGGAAGATTCCCCCTGAGATTGGCAACATTACGTCATTGGAGTATCTGGACCTGTCCGATAACTCTATTTTAGGGAAGATCCCAGAGGAAATTGCGGAGCTGAAGAACTTGCAGTTATTAAATGTAATGAGAAACAAACTGACAGGTTTTATACCAATAAAGCTTGGGGAGCTGAAGAAACTAAAAGTGCTTGAGCTGTGGAAAAATTCTTTACAAGGTCCTTTGCCGGCGAACCTTGGACAGAATTCTCCACTGGAGTGGTTGGACGTGTCTTCTAATTCGTTGTCAGGTGAAATTCCTCCAGGTTTGTGTGCCTCTGGAAATCTCACCAAACTGATACTTTTCAATAATTCCTTCTCTGGCTCCATTCCAAGCGGGATTTCCAATTGTCCGTCTTTGGCACGTGTTCGCATTCATAACAATCTTATATCCGCGACTATTCCAACTGGTTTTGGAAAACTCCCAAACCTTCAAAGGCTGGAATTGGCTAAGAATAATCTCACCGGCCAAATTCCGTTAGACATCACTTCATCCACTTCACTTTCCTTCATTGATGTATCTTGGAACCACCTTGAATCATCCCTACCTTCCGGAATTCTATCAATTCCCACTCTTCAAATCTTCATTGCGTCCAACAATAACTTGAGAGGCAATGTACCAGGTGAGTTCCAGGATTGCTTATCTCTCTCTGTGCTGGATCTTTCAAGCAACCTTATATCTGGAGAAATCCCAGAAAGCATTGCTTCTTGCCAAAAACTAGTCCATTTGAACCTCGGGAACAACCATTTAGCTGGGGAAATTCCAAAATCAATTGCCAACATGCCCACCTTGGCCACTCTTGATCTATCCCACAATATGCTTTCCAGTCAGATACCTGAAAACCTTGGCAGCTCCCCAGCTCTTGAAACGATCAACCTATCCTACAACAAGCTCGAGGGTCCAGTGCCCTCCAATGGAATTTTGACGACCATAAATCCTAATGATCTCGCCTACAATGCCGATCTCTGTGGAGGCGTTCTTCCTCCATGTTCTCACAGCTCAACTCCTATAAACCAGCGAAGGGGCTCACACACAAAGCACATCATTGTTGGCTTTATCACAGGAATATCGGTAATTGTGTTTCTGGGCATTGCATATATTGGTGGGAGATGGTTGTACAATAAATGGTACTTATACAACAACTTCGTCCGCGATTGGTTCAAAGACAGCAACCAAGAATGGCCTTGGAGATTAGTGGCATTTCAGAGGGTTAGCTTCACAAGCAGTGAGATTCTCGCTTGCATTAAGGAGGCAAACATTATAGGAATGGGAGGCACTGGGATTGTGTATAAAGCCGAAATCCATAGGCCTCATGCAACAGTAGCAGTGAAGAAACTATGGAGGTCAGGGGCAGACATAGAAGATGGGAATGATGTGTTGAAAGAAGTGAATCTGTTGGGTAGACTGAGGCATAGGAATATTGTAAGGCTTTTGGGGTATGTACACAACGAAAGGGATGTGATGATGGTGTACGAGTTCATGCCCAATGGGAATCTTGGGACAGCACTTCATGGAGAGCAAGGAGATAGGTTACTAATAGATTGGGTTTCAAGGTATAACGTAGCCGTGGGAGTTGCACAAGGCCTCCATTACCTCCACCATGATTGTCAGCCCCCAGTTATTCACAGGGACATCAAGTCTAACAATATACTGCTTGACGCAAATTTGGAGGCGAGGATAGCTGATTTCGGATTAGCAAAGATGCTGATACATAAGAATGAAACTGTTTCAATGGTGGCCGGATCTTATGGGTACATCGCACCAGAATATGGATACACTCTGAAAGTGGACGAGAAAATCGACATATACAGTTACGGGGTAGTACTTCTGGAGCTGGTAACAGGGAAAAGGCCTCTAGACCTATCATTCGAAGAATGTGGAGACATAGTTGAATGGGTAAGAAAGAAAAGAAGCAATGGAGGGTTGGAAGAAGCTCTAGATCCCACCATAGCGGGCAGGTTCAAGCACGTCCAAGAAGAGATGCTTCTTGTACTCCGAATTGCACTTATCTGTACGGCTAAGCTTCCAAAGGAAAGACCAACCATGAGGGACATAGTGACTATGCTAGGAGAGGCAAAACCCAGAAGAAAAAGCACCTCTCAAAATGGAATACAAGACGAAACCAAGGAAAAACCAATCTTCACAGCTTCTCCCATTATAAGCCTCCTCTAG 3057 0.4416 MQPFTLLFHCFIGLSLVFAEGAQSAFSDELSTLLSIKSSLVDPMRHLKDWQPPANLTRDGSWSPHCNWTGVWCNSNGFIERLDLSNMNLSGRVSDHIQELSSLSFFNISCNNFASSLPKSLSNLTSLKSFDVSQNYFTGNFPMGLGSAKGLISINASSNNFLGFLPEDLGNATLLESIDFRGGYLEGSIPISFKNLHKLKFLGLSGNNFTGKIPGELGELTSLETLILGYNEFEGEVPSEFGNLTNLQYLDLAVGGLSGQIPPQLGRLKSLSTLFLYSNKFEGKIPPEIGNITSLEYLDLSDNSILGKIPEEIAELKNLQLLNVMRNKLTGFIPIKLGELKKLKVLELWKNSLQGPLPANLGQNSPLEWLDVSSNSLSGEIPPGLCASGNLTKLILFNNSFSGSIPSGISNCPSLARVRIHNNLISATIPTGFGKLPNLQRLELAKNNLTGQIPLDITSSTSLSFIDVSWNHLESSLPSGILSIPTLQIFIASNNNLRGNVPGEFQDCLSLSVLDLSSNLISGEIPESIASCQKLVHLNLGNNHLAGEIPKSIANMPTLATLDLSHNMLSSQIPENLGSSPALETINLSYNKLEGPVPSNGILTTINPNDLAYNADLCGGVLPPCSHSSTPINQRRGSHTKHIIVGFITGISVIVFLGIAYIGGRWLYNKWYLYNNFVRDWFKDSNQEWPWRLVAFQRVSFTSSEILACIKEANIIGMGGTGIVYKAEIHRPHATVAVKKLWRSGADIEDGNDVLKEVNLLGRLRHRNIVRLLGYVHNERDVMMVYEFMPNGNLGTALHGEQGDRLLIDWVSRYNVAVGVAQGLHYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLAKMLIHKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELVTGKRPLDLSFEECGDIVEWVRKKRSNGGLEEALDPTIAGRFKHVQEEMLLVLRIALICTAKLPKERPTMRDIVTMLGEAKPRRKSTSQNGIQDETKEKPIFTASPIISLL 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0056 1018 SUPERFAMILY L domain-like 61 311 - -
Mibi02g0056 1018 Gene3D Ribonuclease Inhibitor 150 242 IPR032675 -
Mibi02g0056 1018 Gene3D Ribonuclease Inhibitor 243 335 IPR032675 -
Mibi02g0056 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Mibi02g0056 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 184 284 - -
Mibi02g0056 1018 ProSiteProfiles Protein kinase domain profile. 710 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0056 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 26 183 - -
Mibi02g0056 1018 FunFam MDIS1-interacting receptor like kinase 1 710 792 - -
Mibi02g0056 1018 Gene3D Phosphorylase Kinase; domain 1 710 792 - -
Mibi02g0056 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 368 629 - -
Mibi02g0056 1018 Gene3D Transferase(Phosphotransferase) domain 1 793 1010 - -
Mibi02g0056 1018 ProSitePatterns Protein kinases ATP-binding region signature. 716 740 IPR017441 GO:0005524
Mibi02g0056 1018 ProSiteProfiles Leucine-rich repeat profile. 294 316 IPR001611 GO:0005515
Mibi02g0056 1018 Pfam Leucine rich repeat 486 545 IPR001611 GO:0005515
Mibi02g0056 1018 Pfam Leucine rich repeat 413 473 IPR001611 GO:0005515
Mibi02g0056 1018 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 490 605 - -
Mibi02g0056 1018 Pfam Leucine Rich Repeat 294 314 IPR001611 GO:0005515
Mibi02g0056 1018 Gene3D Ribonuclease Inhibitor 28 149 IPR032675 -
Mibi02g0056 1018 SMART serkin_6 710 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0056 1018 Gene3D Ribonuclease Inhibitor 336 632 IPR032675 -
Mibi02g0056 1018 SUPERFAMILY Protein kinase-like (PK-like) 705 984 IPR011009 -
Mibi02g0056 1018 FunFam MDIS1-interacting receptor like kinase 1 793 1003 - -
Mibi02g0056 1018 SUPERFAMILY RNI-like 257 600 - -
Mibi02g0056 1018 SMART LRR_typ_2 436 460 IPR003591 -
Mibi02g0056 1018 SMART LRR_typ_2 100 124 IPR003591 -
Mibi02g0056 1018 SMART LRR_typ_2 220 243 IPR003591 -
Mibi02g0056 1018 SMART LRR_typ_2 556 580 IPR003591 -
Mibi02g0056 1018 SMART LRR_typ_2 340 364 IPR003591 -
Mibi02g0056 1018 SMART LRR_typ_2 292 316 IPR003591 -
Mibi02g0056 1018 SMART LRR_typ_2 268 291 IPR003591 -
Mibi02g0056 1018 FunFam Leucine-rich repeat receptor protein kinase EMS1 285 367 - -
Mibi02g0056 1018 Pfam Leucine rich repeat N-terminal domain 28 74 IPR013210 -
Mibi02g0056 1018 Pfam Protein kinase domain 712 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0056 Mibi-ChrMibi02 800077 803519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0056 3 1018 Receptor kinase-like Gene Family AT1G08590 63.117 0.0 1256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi02g0056 Pkinase 1.6e-46 CL0016