Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0052 ATGTTATCGTCACCTTCAAAATACCTGAATGACATTTCCTTGTCCTCAGTTTCACAACATGACAGGCAGTATCAAGATTATCCCTTCATTTCTAAGACATTGAGAAGAGATGATGTGATGCCCCGACTAGGAGCTCCACTTGCTCAGGGTGGGGAAGATGCGTCTTTCTCACCTTCACATTCTTCTCGTCCAGAAATACATTCAGCAGCATTCATTTGTCAACCCCCTGAAAGTAATGATATTTCCTGGGGGCCAGATCCCTTTCAGGATGTTCTTAATCTCTCTGTAAATGATTCCGTCCAGAATGATCAGATGGAAAGTAGTTCTTGTTATATGTCTGATGACAATACCAAAAAAACTGATTTTTCGGAGTGGGTAGATCAATTAATATCAGTTGATGAAACTCCTCATCCAAACTGGAGCCAGCTTATTGTTGATGATAATGCAACAGAATCAAAACCCAAGGAGACCGACGCTACCAATCAGCAGCATGCACCGTCTGGAGAAGTTAATACTTCTCCTACTTCAGCGTCAAATGCGCTACAAAGTAAGCCTAGAATGCGTTGGACTCCAGAACTTCATGAAGCTTTCGTGGAAGCAGTGAATAAGCTTGGTGGTAGCGAGAAGGCTACTCCAAAGGGTGTTTTGAACCTAATGAAAGTTGAGGGTCTTACCATCTATCATGTGAAAAGCCATCTACAGAAGTATAGAACAGCCAGATTCAAACCAGAATCATCAGGAGGAGCTTCTGAGAAGAAGTCGACATCAACCAAAGAGATGAACTCTTCAGACTTGGCAGCCATGGGGATCACTGAAGCATTGCGGTTGCAGATGGAGCTCCAGAAGCGGCTTCATGAACAACTTGAGATCCAAAGGAAGTTGCAGCTTCAAATAGAAAACCAAGGGAAGCGTCTTCAGATGATGTTCGAGAAACAAAGAGAGATGGAGGACAGCAAACACAAGACATCCTCCTCCTCCTTGGACAGGCCCACAATTGAGGGTCAAGAAACCTTATACGAGGGTCAAGAAAAATCTGGAATCAGCAACATCAATGCAACAACCATGGCCGAAGAATGTTCTGAGGATGCCTGCACTAAGCAAGAGGTGGAAGAAACTAAAGTTAACAGTGAAGAGGTGGAGCATGATCAGTTGGAAGCACCGGCCTCCAAACGGGTTAAAAGTGTATGA 1188 0.4394 MLSSPSKYLNDISLSSVSQHDRQYQDYPFISKTLRRDDVMPRLGAPLAQGGEDASFSPSHSSRPEIHSAAFICQPPESNDISWGPDPFQDVLNLSVNDSVQNDQMESSSCYMSDDNTKKTDFSEWVDQLISVDETPHPNWSQLIVDDNATESKPKETDATNQQHAPSGEVNTSPTSASNALQSKPRMRWTPELHEAFVEAVNKLGGSEKATPKGVLNLMKVEGLTIYHVKSHLQKYRTARFKPESSGGASEKKSTSTKEMNSSDLAAMGITEALRLQMELQKRLHEQLEIQRKLQLQIENQGKRLQMMFEKQREMEDSKHKTSSSSLDRPTIEGQETLYEGQEKSGISNINATTMAEECSEDACTKQEVEETKVNSEEVEHDQLEAPASKRVKSV 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0052 395 Pfam Myb-like DNA-binding domain 186 237 IPR001005 -
Mibi02g0052 395 MobiDBLite consensus disorder prediction 313 346 - -
Mibi02g0052 395 Coils Coil 271 291 - -
Mibi02g0052 395 FunFam Myb family transcription factor 183 241 - -
Mibi02g0052 395 Gene3D - 183 242 - -
Mibi02g0052 395 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 184 238 IPR006447 GO:0003677
Mibi02g0052 395 MobiDBLite consensus disorder prediction 359 395 - -
Mibi02g0052 395 MobiDBLite consensus disorder prediction 361 388 - -
Mibi02g0052 395 MobiDBLite consensus disorder prediction 238 261 - -
Mibi02g0052 395 MobiDBLite consensus disorder prediction 159 183 - -
Mibi02g0052 395 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 181 241 IPR017930 -
Mibi02g0052 395 MobiDBLite consensus disorder prediction 1 21 - -
Mibi02g0052 395 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 163 372 IPR044848 GO:0003700
Mibi02g0052 395 MobiDBLite consensus disorder prediction 151 183 - -
Mibi02g0052 395 SUPERFAMILY Homeodomain-like 182 238 IPR009057 -
Mibi02g0052 395 Pfam MYB-CC type transfactor, LHEQLE motif 268 314 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0052 Mibi-ChrMibi02 719521 721632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0052 73 312 G2-like Transcription Factor Family AT4G28610 53.668 8.15e-72 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi02g0052 Myb_DNA-binding 6.6e-09 CL0123