Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0048 ATGACGAGGACTCCTTGCTGTGAGAAAATGGGATTGAAGAAGGGACCCTGGACTCCTGAAGAAGATAAGATTTTGATCTCTTTCATTCAACGTTATGGGCACGGAAACTGGCGGGCCCTTCCTAAACTGGCTGGTTTATTGAGGTGTGGAAAGAGTTGCAGGCTTCGTTGGATAAATTACTTGAGACCGGATATAAAACGAGGGAAATTCAGCAAGGAAGAAGAAGAAACCATCCTCAAGCTGCATCAAATTCTTGGAAATAGATGGTCTGCGATTGCGGCGAGATTACCAGGACGAACAGATAACGAAATAAAGAACTTTTGGCACACCCACCTGAAGAAGAGGCTGGAAAGATGCCAAGTGCGTAATGCAAGTGCGTCGACATCCTCATGTGCACAATCTTCTTGGAGCAAAGGGGTGGTGATTCCGACAATGCCACAGTTAGTGGCAGCGGCACAATCATCAAGTGCTGCTAATAATCTTGGTTTCGCTGGCAAGGTTATGGTGAGTGCCAACGAGGGCTTGGCGTCAAGGAAATATGGGGCCACTGTAGATTCAGGACATTCTTGTGATGCAACCCTAGGCGGCCACAGATCTCAGAATATCACTGAAGAAATGGAATTTTGGTATGATCTGTTCATCAAAGCCGGACAGCCGCCGCAAGGGCACGGACATATTGCGTGA 684 0.4737 MTRTPCCEKMGLKKGPWTPEEDKILISFIQRYGHGNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGKFSKEEEETILKLHQILGNRWSAIAARLPGRTDNEIKNFWHTHLKKRLERCQVRNASASTSSCAQSSWSKGVVIPTMPQLVAAAQSSSAANNLGFAGKVMVSANEGLASRKYGATVDSGHSCDATLGGHRSQNITEEMEFWYDLFIKAGQPPQGHGHIA 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0048 227 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Mibi02g0048 227 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 151 - -
Mibi02g0048 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi02g0048 227 SMART sant 66 114 IPR001005 -
Mibi02g0048 227 SMART sant 13 63 IPR001005 -
Mibi02g0048 227 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mibi02g0048 227 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi02g0048 227 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi02g0048 227 FunFam MYB transcription factor 69 139 - -
Mibi02g0048 227 Gene3D - 13 66 - -
Mibi02g0048 227 Gene3D - 69 116 - -
Mibi02g0048 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi02g0048 227 CDD SANT 16 61 IPR001005 -
Mibi02g0048 227 FunFam MYB-related transcription factor 13 66 - -
Mibi02g0048 227 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi02g0048 227 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0048 Mibi-ChrMibi02 665904 666823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0048 1 213 MYB Transcription Factor Family AT2G31180 47.059 4.31e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi02g0048 Myb_DNA-binding 2.7e-15 CL0123