Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0034 ATGTTAATTCATTATGTTAAATGCGCTTATTTATATGGCTTGTGCCACTGCACATGCATGCCAATGAGAAGGAGCACTGTGAAGTGGCCAGAACAAGAATTCTTTATCACATATTCACCTAATTTGAAGCCCATCGTGACCATCAAAATGTCAAATCCAAAGGTGTTCTTTGACATTGTAATTGGAAAGATGAAAGCCGGTCGAATAGTGATGGAGCTATTTGCAGATATCACCCCAAAGACAGCTGAAAACTTCCGAGCTCTGTGCACTGGTGAAAAGGGGATCGGCACATCTGGGAATCCTTTACATTATAAAGGGTCCAAATTTCACCGAATTATTCCACAGTTCATGTGTCAGGGAGGAGATTTCACTAGAGGAAACGGAACTGGAGGAGAATCAATTTACGGCTCGAAATTTGCTGACGAGAATTTCAAGCTGAAGCATACGGGGCCTGGTGTTCTCTCAATGGCTAATGCTGGTCCCAATACTAATGGTTCTCAGTTCTTTATATGCACTTCTAAGACTGGTTGGCTTGACGGGAAACATGTTGTATTTGGAAAAGTTGTTGATGGCTACGGTGTAGTGACGGAAATGGAGAAAGTGGGGTCACAGGGTGGAAGTACCTCAGAACCAGTTGTAATTGAAGATTGTGGTCAGATAGGAGAAAACTGA 672 0.4256 MLIHYVKCAYLYGLCHCTCMPMRRSTVKWPEQEFFITYSPNLKPIVTIKMSNPKVFFDIVIGKMKAGRIVMELFADITPKTAENFRALCTGEKGIGTSGNPLHYKGSKFHRIIPQFMCQGGDFTRGNGTGGESIYGSKFADENFKLKHTGPGVLSMANAGPNTNGSQFFICTSKTGWLDGKHVVFGKVVDGYGVVTEMEKVGSQGGSTSEPVVIEDCGQIGEN 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0034 223 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 54 220 - -
Mibi02g0034 223 CDD cyclophilin_ABH_like 53 218 - -
Mibi02g0034 223 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 61 218 IPR002130 GO:0000413|GO:0003755
Mibi02g0034 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 109 121 IPR002130 GO:0000413|GO:0003755
Mibi02g0034 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 167 179 IPR002130 GO:0000413|GO:0003755
Mibi02g0034 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 152 167 IPR002130 GO:0000413|GO:0003755
Mibi02g0034 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 180 195 IPR002130 GO:0000413|GO:0003755
Mibi02g0034 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 88 IPR002130 GO:0000413|GO:0003755
Mibi02g0034 223 Gene3D - 45 223 IPR029000 -
Mibi02g0034 223 FunFam Peptidyl-prolyl cis-trans isomerase 49 221 - -
Mibi02g0034 223 SUPERFAMILY Cyclophilin-like 45 220 IPR029000 -
Mibi02g0034 223 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 104 121 IPR020892 GO:0003755|GO:0006457
Mibi02g0034 223 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 56 219 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0034 Mibi-ChrMibi02 530253 532615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0034 67 201 U-box Gene Family AT5G67530 50.735 3.98e-31 118