Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0005 ATGATTGGACAAAGAGAACATAACTGCCAAGAGGAAGAAATAATGTGCGGCATATTTGCTTATCTTAACTATAACGTCAACAGAGAAAGGAGGTACATCCTGCAGGTACTATTCAATGGCCTCAGGCGATTGGAATACCGTGGCTATGATTCCGCTGGCATCGCCATCGACTCCTCACTTTCACTCGATCCAAGCACTCCTCAATGCTCGTCAATCCCCATCACCCCTCCTCCTCTTATCTTCCGTCAGGAGGGCAACATCGAATCCCTTGTCAAATCCGTCTACCAAGAAGTTGCTGAAGTGGAATTAAATTTGGAGGAATCTTTCCCCACCCATGCTGGAATAGCGCATACACGATGGGCAACTCACGGAGAGCCTTCTCCAAGGAATAGTCATCCTCAGAGCTCTGGTGCTGGAGATGAATTTTTGGTTGTTCACAATGGGGTTATTACTAATTACGAGGTATTGAAGGAAACATTGGTCCGGCATGGGTTCACATTTGAATCTGAAACCGACACGGAAGTTATTCCAAAACTTGCAAAGCTTGTTTTCGATAAAGCAAATGAGGTAGAAGGCGACCAAGTTGTTACCTTCAGTCAAGTTGTTCTGGAAGTTATGAGGCATCTAGATGGAGCATATGCCCTTATTTTCAAAAGCCGGCATTATCCAAATGAGTTGATTGCTTGCAAGCGTGGCAGCCCACTACTCCTAGGTGTAAAAGAATCGATAGGCAATATGGTTGATTCAGCATTTGAGGATAATAACGTTCTATCAAAAAAGGGCCACCCCAAAGAGTTGTTTTTATCTAGTGATGCTAATGCTGTGGTAGAACATACAAATAAGGTTTTGGATATCGAGGATGGTGAAGTTGTTCACCTCAAGGATGGTGCAGTTTCAATTCTGAAGTTTGAGAATGACAAAGGAAAAACTGATGGTCCCCTTTCTAGACCTGCTTCAGTGCAACGGGCTTTATCAGTTCTTGAGATGGAGGTTGAGCAAATTAATAAAGGACATTATGAGCATTATATGCAGAAAGAAATTCATGAGCAACCTGAATCTCTGACAACCACAATGAGGGGGAGGCTTATTCGGGGAGGATCGAGTAAATTAAAAACCGTACTGTTGGGTGGATTGAAAGACCACCTTAAAACAATCCGAAGAAGTAGAAGGATTGTTTTTATCGGCTGTGGTACCAGTTACAACGCAGCTTTGGCAGCTAGACCAATATTGGAAGAACTTACTGGAATCCCTGTTACCATGGAAATCGCTAGTGATCTATTGGATCGGCAGGGCCTTATATACAGGGAAGATACTGCTGTTTTTGTAAGTCAGTCGGGTGAAACTGCAGATACTTTACTTGCATTGAAATATGCTTTAGACAATGGTGCATTATGTGTTGGCATAACAAATACCGTTGGTAGTGCAATAGCAAGAATTACACATTGTGGTGTACATATAAATGCTGGTGCTGAGATAGGTGTGGCAAGTACTAAGGCTTACACAAGTCAAATAGTAGTGATGGCCATGTTGGCACTTGCAATAGGAGGTGACACAATTTCTAGTCAAGCCAGAAGAGAAGCTATTATCGATGGTCTCTTGGACCTGCCAAATAAAGTCAGGGAGGTGCTGAAGCAAGACCAGGAGATGAAGGATCTGGCGAAATTGTTAATGTCTGAGCAGTCTCTTCTTGTCTTTGGAAGAGGATTCAACTACGCAACAGCTCTGGAGGGAGCTTTGAAAGTAAAGGAAGTTTCTCTTATGCACAGTGAAGGAATACTTGCTGGTGAAATGAAGCACGGTCCTTTGGCCTTGGTGGATGAAAATCTTCCTATCATTGTTTTGGCTACCCGTGATGCTTGCTTCAGCAAGCAGCAGTCTGTCATTCAGCAACTTCATGCTCGCAAAGGCCGTCTTATAGTTTTGTGTTCAAAAGGGGATGCTGCGTTGGTGTCTCCTGGTGAATCTTGTAGGGTAATTGAAGTTCCACCTGTTGAAGACTGTCTTCAACCTGTAATTAATATAATTCCACTACAGTTACTGGCATATCATCTCACTGTACTTAAAGGATTAAATGTTGACCAGCCTCGGAATCTCGCCAAGAGTGTCACAACACAGTGA 2118 0.4315 MIGQREHNCQEEEIMCGIFAYLNYNVNRERRYILQVLFNGLRRLEYRGYDSAGIAIDSSLSLDPSTPQCSSIPITPPPLIFRQEGNIESLVKSVYQEVAEVELNLEESFPTHAGIAHTRWATHGEPSPRNSHPQSSGAGDEFLVVHNGVITNYEVLKETLVRHGFTFESETDTEVIPKLAKLVFDKANEVEGDQVVTFSQVVLEVMRHLDGAYALIFKSRHYPNELIACKRGSPLLLGVKESIGNMVDSAFEDNNVLSKKGHPKELFLSSDANAVVEHTNKVLDIEDGEVVHLKDGAVSILKFENDKGKTDGPLSRPASVQRALSVLEMEVEQINKGHYEHYMQKEIHEQPESLTTTMRGRLIRGGSSKLKTVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELTGIPVTMEIASDLLDRQGLIYREDTAVFVSQSGETADTLLALKYALDNGALCVGITNTVGSAIARITHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISSQARREAIIDGLLDLPNKVREVLKQDQEMKDLAKLLMSEQSLLVFGRGFNYATALEGALKVKEVSLMHSEGILAGEMKHGPLALVDENLPIIVLATRDACFSKQQSVIQQLHARKGRLIVLCSKGDAALVSPGESCRVIEVPPVEDCLQPVINIIPLQLLAYHLTVLKGLNVDQPRNLAKSVTTQ 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0005 705 Gene3D - 541 690 - -
Mibi02g0005 705 CDD SIS_GlmS_GlmD_2 547 703 IPR035490 -
Mibi02g0005 705 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 16 312 IPR029055 -
Mibi02g0005 705 CDD GFAT 16 293 - -
Mibi02g0005 705 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 15 705 - -
Mibi02g0005 705 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 16 296 IPR017932 -
Mibi02g0005 705 CDD SIS_GlmS_GlmD_1 390 515 IPR035466 -
Mibi02g0005 705 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 337 611 - -
Mibi02g0005 705 Pfam Glutamine amidotransferase domain 110 227 - -
Mibi02g0005 705 Gene3D - 337 704 - -
Mibi02g0005 705 ProSiteProfiles SIS domain profile. 552 695 IPR001347 GO:0097367|GO:1901135
Mibi02g0005 705 SUPERFAMILY SIS domain 336 704 IPR046348 GO:0097367|GO:1901135
Mibi02g0005 705 Pfam SIS domain 385 512 IPR001347 GO:0097367|GO:1901135
Mibi02g0005 705 Pfam SIS domain 556 687 IPR001347 GO:0097367|GO:1901135
Mibi02g0005 705 TIGRFAM glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 16 703 IPR005855 GO:0004360|GO:1901137
Mibi02g0005 705 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 16 316 - -
Mibi02g0005 705 ProSiteProfiles SIS domain profile. 381 520 IPR001347 GO:0097367|GO:1901135
Mibi02g0005 705 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 16 302 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0005 Mibi-ChrMibi02 110935 118076 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0005 107 238 PRT Gene Family AT2G16570 27.206 1.20e-06 50.1