Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3613 ATGAGACAAATTTCGACCTCGCGCGCTGTCGTCATATGGACGGAATTTGAGAATGTTGGTAGTAACAATGCTATATATGCCATGCATGGCAGATATCTGCACCTTCAGTCCTCGCGGTGTGGTGTGGGCGTCGAGCTCAAACTTGGTCAATTCTACCTGCCCTGCATTCGTAGTCCGTCCATCCTTGGTTCTGGTTCTGGCAACCTTCTCTCTCTGGCTCGCCTTTCTTTCCTTCCCTTCTCTCCAAAAATCAAATCCTGCCCCCTAATCCTCTCTCATTATTCCTCCACTTCGGCAACTCACCTCGATTGCCTATCTCTCATGGGTCGCGATTCACCAACTTCACTCGCTCCGGGCTTCCGATTCCACCCCACCGACGAAGAACTCGTTCGTTACTACCTTAGACGCAAGGTCTCCGGCAAATCCTTTCGCTTCGACCCTATCGCCGTCATCGACATCTATAAATCCGAACCCTGGGACCTCCCTTGTCAGTCGAAGCTGAAAAGCCGGGACTTGGAGTGGTACTTCTTCAGTGCGCTGGACAAGAAGTATGGAAATGGGTCGAGAACGAATCGGGCCACTGAAAAAGGATACTGGAAGACTACGGGCAAGGATCGCCCCGTTCGACACGGCTTTTGTACCATCGGAATGAAGAAGACCCTCGTTTATCACAGCGGGCGGGCGCCGCGCGGTACCCGTACCAATTGGGTCATGCACGAATACAAATTAGCTGATGAAGAATTAGCAAAAACAGAAATACCACAGGATGCGTTTGTGCTTTGTAGGATTTTTCAGAAGAGTGGTACTGGGCCAAAGAATGGGGAGCAGTATGGTGCCCCCTTTATAGAGGAGGAATGGGAAGATGATGTTGCCGTGGCCCCACTGCCAGGCGATGAGGCCGCAACTGATGAACTAATTGTTGGTGATGATGCTTATGTTGAAACGGATGACCTTGACCAGTACTTTGATATGGGTGTGGCATCCGAAGGTGCTGGGCATGCATTAAACTTCTATCACGGGGAATGCAGCAGTTATCCTGAGGATTCTGAAGAATTGATTGATGACCAAAAGCCCTTGGTAGGAATTTCCAAAAATTATGAGCCTCAAGATGACCTTTTATTGAATAAGCCTGAGCAGCATGCCTCAGTTGGCAAACCAATGAAAGATGGCGTCAAGGCTGAAGCAAGTCATGAAGGATACTTCGTGAATGACAATTGCACATTTGATGAGACATACTTGGATGCCACTGATGGATCATTCCTGCAAACTGATGATCTAATGAATTCTGCTGGGGCAGATCTTGCTGATACTGATGTTCTTGAAGAGTATCTTACGTACTTTAATGATGTTGATGATATTTCTCAGTATATCTCTTTCGATTATCCTGAGTTGATAGGGTGTGAAAACCCTGATGGTGACCAAGGACCACCATTAACCCAACTGAATGTGGGTGGAGAATCAAAGGATATTCTCATGGCAAGTAAGATAGATGCAGAAGCCCATTCTAGCAAAGAAGTTTCTTTGAAGCAGCATCTAGAGGCATCAAAATTGGTGTCAGGAAATGCATACCCATTTATGAAGCAGACCAGTCACTTGTTGGGCAGCATCCCTGCTCCCCCTGCATTTACTTCAGAGTTTCCTCCTAAAGAAGCTGCCCTTCGCCTGCATCCCACTGGTCAACGTTCCAATTCAGCTCATGTAACTGCAGGTATGATCAGAATAACAGACTTCACTATAACAGACAACAGGATGGACTGGATGCTCAGGAAAAATGGAGAGTTCAGCGTTATAATCTCATCTTGCTTTTGGCCTGATGTTAACTCTGTTACTTCAGTGCCTATTTCTGGTGTACTCTCTGGGAAGTCTGCATTTGTAGTTTCACACGGCTGGATTTTCTTAGTCTTCTTTTCAGTGCTGATTCTTTCACTGAGTTTCAAGATTGGAAGTTTCATGTATACCAGCAGATGA 1968 0.466 MRQISTSRAVVIWTEFENVGSNNAIYAMHGRYLHLQSSRCGVGVELKLGQFYLPCIRSPSILGSGSGNLLSLARLSFLPFSPKIKSCPLILSHYSSTSATHLDCLSLMGRDSPTSLAPGFRFHPTDEELVRYYLRRKVSGKSFRFDPIAVIDIYKSEPWDLPCQSKLKSRDLEWYFFSALDKKYGNGSRTNRATEKGYWKTTGKDRPVRHGFCTIGMKKTLVYHSGRAPRGTRTNWVMHEYKLADEELAKTEIPQDAFVLCRIFQKSGTGPKNGEQYGAPFIEEEWEDDVAVAPLPGDEAATDELIVGDDAYVETDDLDQYFDMGVASEGAGHALNFYHGECSSYPEDSEELIDDQKPLVGISKNYEPQDDLLLNKPEQHASVGKPMKDGVKAEASHEGYFVNDNCTFDETYLDATDGSFLQTDDLMNSAGADLADTDVLEEYLTYFNDVDDISQYISFDYPELIGCENPDGDQGPPLTQLNVGGESKDILMASKIDAEAHSSKEVSLKQHLEASKLVSGNAYPFMKQTSHLLGSIPAPPAFTSEFPPKEAALRLHPTGQRSNSAHVTAGMIRITDFTITDNRMDWMLRKNGEFSVIISSCFWPDVNSVTSVPISGVLSGKSAFVVSHGWIFLVFFSVLILSLSFKIGSFMYTSR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3613 655 Gene3D NAC domain 125 269 IPR036093 GO:0003677|GO:0006355
Mibi01g3613 655 ProSiteProfiles NAC domain profile. 116 266 IPR003441 GO:0003677|GO:0006355
Mibi01g3613 655 FunFam Nac domain-containing protein 86 125 269 - -
Mibi01g3613 655 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 115 307 - -
Mibi01g3613 655 SUPERFAMILY NAC domain 114 266 IPR036093 GO:0003677|GO:0006355
Mibi01g3613 655 Pfam No apical meristem (NAM) protein 118 243 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3613 Mibi-ChrMibi01 62917526 62923525 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3613 108 647 NAC Transcription Factor Family AT5G04410 44.786 1.17e-142 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi01g3613 NAM 8.8e-36 No_clan