Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3608 ATGACAGATTTTCAACCGCTACAACAGAAGCCTGAATCCACTGATGCCCATTCTGAGTTTGAACGTGGCCTGGAGGACTTTATGCGGGGCCACTTGGATGATTGCATGTCCTTTGCTTCATGTAGTTCTGCCCGAACTCAGGATGGGGAGGACGATGAGGGTGATCAGCTAGTTAGGAGGAGGAGAAGATCTGATCATGAGGGGGATGATTTAGCAGAATCATCAGCTGCACGCCGGCACCACTCACGGATTTTGAGCAGATGGGCTGCCCACCAGGCCCAAGAGATGATAACTACAATTGAGAGGAGGAATCGGGAGTCTGAGTTGATGGCACTTGCAGGACTACACACGGTCTCAATGTTGGACTCGTCTTTTTTGAGAGGATCACAGACTCCAACTTCTGGCCAGGAGGGGGCTGTAGAGAGGCCCAGCACTCAGGCTTCTGCAATTCTTCAGATGTGGCGTGAATTGGAGGATGAACACTTGCTTAATCGGGCACGGGAAAGAATGAGGGAAAGGTTGCGTCAAGAAAGGACTGCTGACTCTAATGCCAATGGATCAAGTACCATGTCAGATAGCCGGGGAAGTGAGAATCAGGGGAGTTTGGTGGATGCAAGTGAAAGTGAAAATTATTATGCGACTTGGTCACATGATCAGATCCGACCTCAGCATGAAAATGGTGACCATAATGGGTCTAGCAGGGAGCAATCTCCTGATCTTGGTGAAGTTGAGAGGGAGAGAGTTAGACAGATTGTGCGTGGATGGATGGAAAGTGGCATTAGTGATCATTCATCTAATGCAAGTCCGAGGAACAATAATCACAGAGCAGAGTGGCTTGGTGAAACAGAGCGTGAAAGAGTAAGAATTGTCAGGGAGTGGGTGCAAATGACAAGTCAGCAGCGAGGTTCTCGTGGGATTCGCAGGGATAGTCAAGGCACTGAAAGTGGTTCTCGAGTTGAAAGAGTCCATGATGGATTGTTAACGGATCATGATGAGAGCCAGCAAGAGCATGTACGCAGAGATTTGTTGAGGTTGCGTGGAAGACAAGCTCTGGTTGATTTGCTTGTGAGGGTTGAAAGGGAAAGACAAAGAGAGCTGCAGGGTTTGTTGGAGCACCGTGCTGTTTCTGATTTTGCTCATCGTAACCGCATTCAGTCATTACTCAGAGGTAGATTCCTCCGAAATGAAAGAACTATAGAAGATGAGAGGCCTCCTTCTGTGGCTTCAAACGAATTAGTTCAGTTAAGACAACGCCACACAGTCTCTGGTTTAAGAGAAGGGTTTCGCTCAAGATTAGAAAATATTGTCCGTGGTCAAGCTAGCAGCAATTCTGATGCCACATCTTATAGTAATATCAGTGAAACTAGAAGTGACGTGAACCAAGAAAACAATTCAATAGATGCCCAGAATGAAAGTTATGAACAAGGGCAGATTAGGAGCCTCGAAACTGATGTGCAGCAGTCGTCTGCTCAAACAGGAACTTTTGAAAGTAGCACTAGTGAGATTATAAGTTGGCAAGAAACTAGTAATCAGGGAGGGAGCTGGCAGGAACAAGTTATTGAAGATGGTCGTGGAAATTGGCAACCGAGAGCTTATGGTCCATTGAATCAATTAAGAGATGGAAGTGCTGTTAGTGATTGGCAGCAGGATTCTCCAATAACTGTAGAAGGGGAAGATACTCGTTCCCGAGAAGCTCGGGGAATTTGGCATGAGGCTAATTCAAGGGAAGATGCTGGTAATTGGTCTGAAGAACCTTCTGGTCCTACAAGGAATCGACGTGGTGTTCCTTTTAGGAGATTCAATAGATTTCATCCACCTGTCGATGATAATGTATATAGCATGGAGCTTAGAGAACTTTTGAGCAGGAGAAGTGTTTCCAATCTTCTTCGCAGTGGTTTCCGTGAAAGTCTGGACCAATTAATCCAGTCATATGTGGAAAGGCAAAATCGTGCACCTATTGACTGGGATTTGCACAGAAACTTGCCAACACCAACTCCTGCCTCACCCAATAGGGATCCTGAACAGGCGGATGCACGTAATGGAGTTCAACATGATGCCATTAATAGGCCTTCTCGAGTGTTTCCATCTCCACCAGTTCCTCCACCTCAACCACTTTGGCACCAGGACTTGCATCAGACTGGATGGTCTCGCCATAGCATGCATCGATCTGAAATTGAATGGGAGATAATCAATGATTTGAGATCAGATATGGCAAGACTTCAGCAAGGCATGAATCACATGCAGAGGATGTTGGAGGCTTGCATGGATATGCAACTTGAGTTACAACGTTCTGTCAGACAGGAAGTGTCTGCAGCGCTGAATCGTTCAGCGGGTGAAAGTGGAATGGGGGCAGAGACATCTGAGGATGGGTCTAAATGGGGCCATGTGAAAAAAGGAACTTGTTGTGTTTGTTGTGATAGCCATATTGATTCGCTTTTGTACAGATGTGGTCACATGTGCACTTGTTCAAAATGTGCCAATGAATTAGTTCGTGGTGGAGGAAAGTGCCCTTTATGCCGAGCACCTATCGTGGAGGTGATCCGAGCATATTCCATTATGTAA 2562 0.4633 MTDFQPLQQKPESTDAHSEFERGLEDFMRGHLDDCMSFASCSSARTQDGEDDEGDQLVRRRRRSDHEGDDLAESSAARRHHSRILSRWAAHQAQEMITTIERRNRESELMALAGLHTVSMLDSSFLRGSQTPTSGQEGAVERPSTQASAILQMWRELEDEHLLNRARERMRERLRQERTADSNANGSSTMSDSRGSENQGSLVDASESENYYATWSHDQIRPQHENGDHNGSSREQSPDLGEVERERVRQIVRGWMESGISDHSSNASPRNNNHRAEWLGETERERVRIVREWVQMTSQQRGSRGIRRDSQGTESGSRVERVHDGLLTDHDESQQEHVRRDLLRLRGRQALVDLLVRVERERQRELQGLLEHRAVSDFAHRNRIQSLLRGRFLRNERTIEDERPPSVASNELVQLRQRHTVSGLREGFRSRLENIVRGQASSNSDATSYSNISETRSDVNQENNSIDAQNESYEQGQIRSLETDVQQSSAQTGTFESSTSEIISWQETSNQGGSWQEQVIEDGRGNWQPRAYGPLNQLRDGSAVSDWQQDSPITVEGEDTRSREARGIWHEANSREDAGNWSEEPSGPTRNRRGVPFRRFNRFHPPVDDNVYSMELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQNRAPIDWDLHRNLPTPTPASPNRDPEQADARNGVQHDAINRPSRVFPSPPVPPPQPLWHQDLHQTGWSRHSMHRSEIEWEIINDLRSDMARLQQGMNHMQRMLEACMDMQLELQRSVRQEVSAALNRSAGESGMGAETSEDGSKWGHVKKGTCCVCCDSHIDSLLYRCGHMCTCSKCANELVRGGGKCPLCRAPIVEVIRAYSIM 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3608 853 Coils Coil 730 750 - -
Mibi01g3608 853 MobiDBLite consensus disorder prediction 656 680 - -
Mibi01g3608 853 MobiDBLite consensus disorder prediction 46 80 - -
Mibi01g3608 853 MobiDBLite consensus disorder prediction 1 22 - -
Mibi01g3608 853 MobiDBLite consensus disorder prediction 307 321 - -
Mibi01g3608 853 MobiDBLite consensus disorder prediction 180 206 - -
Mibi01g3608 853 MobiDBLite consensus disorder prediction 480 500 - -
Mibi01g3608 853 MobiDBLite consensus disorder prediction 127 146 - -
Mibi01g3608 853 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 783 851 IPR013083 -
Mibi01g3608 853 SUPERFAMILY RING/U-box 800 846 - -
Mibi01g3608 853 MobiDBLite consensus disorder prediction 300 321 - -
Mibi01g3608 853 MobiDBLite consensus disorder prediction 42 83 - -
Mibi01g3608 853 MobiDBLite consensus disorder prediction 221 244 - -
Mibi01g3608 853 MobiDBLite consensus disorder prediction 173 206 - -
Mibi01g3608 853 MobiDBLite consensus disorder prediction 571 594 - -
Mibi01g3608 853 ProSiteProfiles Zinc finger RING-type profile. 801 840 IPR001841 -
Mibi01g3608 853 MobiDBLite consensus disorder prediction 439 464 - -
Mibi01g3608 853 Pfam Zinc finger, C3HC4 type (RING finger) 798 845 - -
Mibi01g3608 853 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 110 853 - -
Mibi01g3608 853 CDD mRING-HC-C3HC5_NEU1 800 840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3608 Mibi-ChrMibi01 62694205 62700018 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3608 778 847 C3H Transcription Factor Family AT3G06140 37.143 4.87e-07 50.8