Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3587 ATGGAGATGGAATCAAGCGTTCCACCGGGGTTTAGATTCCGTCCGACAGAGGAAGAACTAGTGGGGTACTACCTGAAGAGGAAGATAAACTCGATGAAAATGGATATAGATGTGATTGCGGAGCTGGATCTGTACAAAATAGAACCATGGGACATTCAAGAGAGATGCAAGATGGGGTATGAGGAAGAGAAGGAGTGGTATTTTTTCAGCCACAAGGACAAGAAGTATCCGACGGGGACAAGAACGAACAGGGCGACGGCGGCAGGGTTCTGGAAGGCGACGGGGAGGGACAAGGCGGTGATATCAAAGAAGAACAGAATGATAGGAATGAGGAAGACTCTCGTCTTCTACAAGGGACGTGCCCCTTATGGCTCCAAGACCGATTGGATTATGCATGAGTTTCGCCTCCAAGCCTCCCATCACGCCCCTCCTCACGAAGAAGGATGGGTGGTGTGCCGAGCATTCAAGAAACCTAGTCCCACGATTCAGAACAGACAAGGTTTGGAATGTTGGAGTAACCAAGCACACTTTTTCAGTTCAAGACCTCAATCTCTATCATCATCATTTACCAGCGAAACCCTTAATCAGCTGCTTTACCCTACCAATGAAGGACTAAGTTTTAGCCATCATCATCATCCATTCACTTCGAATCAGCAGTTCCTGTCAAACGACACCGTTTTGGACGACCACAACAACAGCCACCTTGTTGAGCTCATTCCTCAATTACAAAGCCCCACAGCAAGAGTAGTGAAACAACATGGCTTCACAAACGAAGAATGTTACACTCAATTAGAAAGGACGACTACCACGACCACTAATAACAACGTTAACAAGGATGGCCAAGGCATTGATTGGAAGAGCCTGGACAACTTGTTCACTTCACAGTTCTCAGATGATACTGCCTCCCCTGCTTATTTCTCTCATCCAAACATGCCCTTGTTACCATATGCTAGTAGTAGTCATGACGTACAAGTATTACCACCTCAAAATCATCAGGCCAGCCATGTTCTCGGATGCTTTCCCGATTCATAA 1032 0.4651 MEMESSVPPGFRFRPTEEELVGYYLKRKINSMKMDIDVIAELDLYKIEPWDIQERCKMGYEEEKEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVISKKNRMIGMRKTLVFYKGRAPYGSKTDWIMHEFRLQASHHAPPHEEGWVVCRAFKKPSPTIQNRQGLECWSNQAHFFSSRPQSLSSSFTSETLNQLLYPTNEGLSFSHHHHPFTSNQQFLSNDTVLDDHNNSHLVELIPQLQSPTARVVKQHGFTNEECYTQLERTTTTTTNNNVNKDGQGIDWKSLDNLFTSQFSDDTASPAYFSHPNMPLLPYASSSHDVQVLPPQNHQASHVLGCFPDS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3587 343 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Mibi01g3587 343 Pfam No apical meristem (NAM) protein 8 136 IPR003441 GO:0003677|GO:0006355
Mibi01g3587 343 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Mibi01g3587 343 FunFam Nac domain-containing protein 86 16 160 - -
Mibi01g3587 343 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 251 - -
Mibi01g3587 343 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3587 Mibi-ChrMibi01 62429787 62431945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3587 3 343 NAC Transcription Factor Family AT1G71930 50.852 6.52e-106 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi01g3587 NAM 2.6e-36 No_clan