Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3577 ATGGCTAGGTATGCCTACATATCCTCTTTCCTCTTCCTTTCTACGTGCTTTTGGTTCTGCCCATTGGCGTTGTCTGAGCTATCCCAGAGCCAAACCAACACCATGATCACGCTCTCCGAGCTTCGTGACGGAACTGAATTAGCTGCTTCATGGAACATTACCACAAACCCAAATCCATGCCAATGGGAGGGGGTTCATTGCGATAACGCCAATTCATCTATAATCCAATTTCAGCTGTCTCGATGTTCCATCTCTTCCTCCGAATTTCTGACTCCTCTTTGCCAAATTGAAAGTTTGCAGCGTCTTGATCTTTCTGGTAACTCCATTAGCTCAATTCCAGATAGTTTCATCACTGATTGTGGAAAGGTTGAGGGGTTAAAGTTTCTCAATTTCAGTAGAAACAACATAAGGGGTCCCTTGCCTACTTTTCGTGGATTTAATGTGTTAGAATCCCTGGATATGTCTTTCAATAACTTCTCAGGAAAAATTGATTCTGAGTTGGCTGGATTAGCTAGCCTCAAGAGCTTAAATCTTAGTTTCAATTCTTTCAATGGGACCCTTCCTTACAAACTGGGGAATTCCGCAGCTTTGGAGCTGCTTGAGCTAAGTGTCAATCACTTTGAAGGAACGATCCCTGCTGAAATCATGAGTTACACAAATTTGACTTTGCTTGATCTTGGAGGAAATAAGCTTTCAGGGCCTATTCCTGGCAACATAGGAAATCTATCCAAATTGGAAACATTGATTCTGTCCTCAAATGGCCTTGTAGGGGCAGTCCCTAGTAGACTCTCGAACATCAAAACCCTCGTCCGTTTTGCAGCCAATCAAAACCAATTTAATGGTTCTGTTCCCAGCGGAATTACAAGTTTTCTCAAGAACTTAGATCTCAGTTATAATAAGTTGTCCGGGCCTATTCCAGCAGACTTTCTTTCATGGTTTAATCTGGTGTCGGTGGATTTGTCCAGTAACTCGTTATCTGGGCCCTTACCTGCCGACATATCTCCTAACATTGTCAGGTTGAGATTAGGGGGGAATTCTCTGGATGGGACGATATCTCCAAAAGCATTTTTGACAGGTCAGAATTTGACGTATATTGAACTTGAAGCCAATAACTTGAAAGGCCCTATACCTGCTGAGGTGAGTTCTTGCCGGAATTTGGCCTTATTGAACTTGGCTCAGAATCACATATCTGGTGGATTGCCTGCAGAGCTTGGTCAGCTGAAGAATCTTCAAGTCTTGCAGCTTCAGGGGAATAACCTTTCTGGACAAATTCCAACTGTAGTGTCTCAGCTACATAAGTTGTCAACGCTGAATTTGAGTGACAATTCTCTGAATGGATCCATTCCATCAGAAATGTTCAACTTGGGAACCCTTACTAAGCTTTACTTACAGCAAAACAACCTCAGTGGCTCTATTCCCACATCTATAAGCGGCATGAACTCTCTTATTGAACTTCAACTTGGAAAGAACCAGCTAAGCGGTTTGATTCCAAAAATGCCGGGGAATCTTCAGATTGCCTTGAATCTCAGCAGCAATCTCTTTGCGGGGCATATTCCTAGCACTCTTGATGGGTTGAGTAACCTGGAAATCTTGGATCTTTCAAATAACAAATTTGATGGTGAAGTTCCTGATTTTCTTACCAGAATGCAGGCTTTGACACAGTTGGACCTTTCTCATAATAAGCTGCATGGAGTCATTCCTGACTTTAATCCTCATGTTAAAGTTGATTGGGATGGAAATAATCTCGTAAGCAAAACTGCAAATTCTAACACTTCCCCAAGATCTTCGAAAGGAAGTCCTGTTCTCATGGCAGTTCTTGTTGCAATTGCTGCCGCAGTTTTTCTAGTTGGCCTGGTCACTGTGCTGGCTGTTCTAATCTCACGACGCTTGTACAGGGTAAATGATGAACACTTGCAGCCACATGAAGACACTCAAGCCCCTCAGGTCATCCAAGGAAACTTATTAACTCCAAACGGAATTCACAGATCCAACATTGATTTCTCTAAGGCCATGAAGGATGTTGCTGAAACATCAAACATTACTCTGAAAACAAGGTTTTCGACTTATTTCAAGACTATCATGCCATCTGGATCAATATACTTTGTCAAGAAACTTAACTGGAGTGGGAAGCTATTCCCACTGGGCAGTCATGATAAATTTGGTAAAGAGCTAGAGGTCTTGGCAAAATTGAACAATTCAAATGTCATGACTCCTCTAGGTTATGTTCTATCCACTGACAGCGCGTATATACTGTATGAATTTATCTCAAATGGCTCCCTTTATGATGCTCTTCATGGAAGCGTTCAAAACTCTTTAGATTGGGCTAGCAGATATAGTATAGCTGTTGGGGCGGCTCAAGGTCTCTCTTTTCTGCATGCATTTACCTCAGGTCCAATTCTTCTCCTTGACCTATCAAGTAAAAGTATAATGCTGAAGTCCCTTAAGGAGCCTCTAGTTGGAGATATTGAACTTTACAAGGTGATTGATCCTTCGAAGAGTACAGGAAGCTTTTCTGCAGTTGCTGGTTCTGTTGGCTATATTCCTCCAGAGTATGCATACACAATGAGAGTGACGATGGCTGGGAATGTGTACAGCTTTGGGGTGATCCTGCTTGAATTGTTAACGGGAAAGCCAGCAGTGACTGATGGGACCGAATTGGTGAAGTGGGTGATGCGCTATTCAACAAAGCAAGAACACATTCTGGATTTTAATGTCAGTAAAACATCTCCTGCTGTAAAAAACCAGATGCTTGCGATCCTTCAGATAGCTCTTTCATGTGTCAGTGCATCCCCTGAAGCAAGACCAAAGATGAAGAGTGTGCTCCGAATGCTCCTTAATGCGCGATAA 2847 0.4254 MARYAYISSFLFLSTCFWFCPLALSELSQSQTNTMITLSELRDGTELAASWNITTNPNPCQWEGVHCDNANSSIIQFQLSRCSISSSEFLTPLCQIESLQRLDLSGNSISSIPDSFITDCGKVEGLKFLNFSRNNIRGPLPTFRGFNVLESLDMSFNNFSGKIDSELAGLASLKSLNLSFNSFNGTLPYKLGNSAALELLELSVNHFEGTIPAEIMSYTNLTLLDLGGNKLSGPIPGNIGNLSKLETLILSSNGLVGAVPSRLSNIKTLVRFAANQNQFNGSVPSGITSFLKNLDLSYNKLSGPIPADFLSWFNLVSVDLSSNSLSGPLPADISPNIVRLRLGGNSLDGTISPKAFLTGQNLTYIELEANNLKGPIPAEVSSCRNLALLNLAQNHISGGLPAELGQLKNLQVLQLQGNNLSGQIPTVVSQLHKLSTLNLSDNSLNGSIPSEMFNLGTLTKLYLQQNNLSGSIPTSISGMNSLIELQLGKNQLSGLIPKMPGNLQIALNLSSNLFAGHIPSTLDGLSNLEILDLSNNKFDGEVPDFLTRMQALTQLDLSHNKLHGVIPDFNPHVKVDWDGNNLVSKTANSNTSPRSSKGSPVLMAVLVAIAAAVFLVGLVTVLAVLISRRLYRVNDEHLQPHEDTQAPQVIQGNLLTPNGIHRSNIDFSKAMKDVAETSNITLKTRFSTYFKTIMPSGSIYFVKKLNWSGKLFPLGSHDKFGKELEVLAKLNNSNVMTPLGYVLSTDSAYILYEFISNGSLYDALHGSVQNSLDWASRYSIAVGAAQGLSFLHAFTSGPILLLDLSSKSIMLKSLKEPLVGDIELYKVIDPSKSTGSFSAVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKPAVTDGTELVKWVMRYSTKQEHILDFNVSKTSPAVKNQMLAILQIALSCVSASPEARPKMKSVLRMLLNAR 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3577 948 Gene3D Ribonuclease Inhibitor 187 288 IPR032675 -
Mibi01g3577 948 Pfam Leucine rich repeat N-terminal domain 48 68 IPR013210 -
Mibi01g3577 948 Gene3D Ribonuclease Inhibitor 35 186 IPR032675 -
Mibi01g3577 948 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 29 190 - -
Mibi01g3577 948 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 331 586 - -
Mibi01g3577 948 Pfam Protein tyrosine and serine/threonine kinase 717 944 IPR001245 GO:0004672|GO:0006468
Mibi01g3577 948 SUPERFAMILY L domain-like 50 331 - -
Mibi01g3577 948 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 212 305 - -
Mibi01g3577 948 Gene3D Ribonuclease Inhibitor 289 602 IPR032675 -
Mibi01g3577 948 ProSiteProfiles Leucine-rich repeat profile. 98 119 IPR001611 GO:0005515
Mibi01g3577 948 SMART LRR_typ_2 407 430 IPR003591 -
Mibi01g3577 948 SMART LRR_typ_2 525 548 IPR003591 -
Mibi01g3577 948 SMART LRR_typ_2 242 266 IPR003591 -
Mibi01g3577 948 SMART LRR_typ_2 96 119 IPR003591 -
Mibi01g3577 948 SMART LRR_typ_2 431 455 IPR003591 -
Mibi01g3577 948 SMART LRR_typ_2 479 502 IPR003591 -
Mibi01g3577 948 SMART LRR_typ_2 170 194 IPR003591 -
Mibi01g3577 948 SMART LRR_typ_2 549 571 IPR003591 -
Mibi01g3577 948 Gene3D Phosphorylase Kinase; domain 1 653 754 - -
Mibi01g3577 948 SUPERFAMILY Protein kinase-like (PK-like) 686 944 IPR011009 -
Mibi01g3577 948 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 755 948 - -
Mibi01g3577 948 ProSiteProfiles Protein kinase domain profile. 675 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3577 948 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 166 287 - -
Mibi01g3577 948 Gene3D Transferase(Phosphotransferase) domain 1 755 948 - -
Mibi01g3577 948 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 643 754 - -
Mibi01g3577 948 Pfam Leucine rich repeat 507 562 IPR001611 GO:0005515
Mibi01g3577 948 Pfam Leucine rich repeat 98 159 IPR001611 GO:0005515
Mibi01g3577 948 SMART LRR_sd22_2 407 433 - -
Mibi01g3577 948 SMART LRR_sd22_2 455 481 - -
Mibi01g3577 948 SMART LRR_sd22_2 218 244 - -
Mibi01g3577 948 SMART LRR_sd22_2 96 128 - -
Mibi01g3577 948 SMART LRR_sd22_2 549 570 - -
Mibi01g3577 948 SMART LRR_sd22_2 525 540 - -
Mibi01g3577 948 SUPERFAMILY RNI-like 250 567 - -
Mibi01g3577 948 PRINTS Leucine-rich repeat signature 291 304 - -
Mibi01g3577 948 PRINTS Leucine-rich repeat signature 525 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3577 Mibi-ChrMibi01 62253892 62257023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3577 149 948 Receptor kinase-like Gene Family AT2G41820 39.016 2.21e-159 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi01g3577 PK_Tyr_Ser-Thr 1.1e-23 CL0016