Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3553 ATGGGTTTGGAATCAGAGTCGGAGTGTTTCAGCAAAATGATGGCTTCCATGCCGGGGTTTCGCTTCCACCCTACGGACGAGGAGCTGATCATGTATTATCTCAAGAGGAAGATGTCTGGTAAGAAGCTGAAGCTTGACGTGATCCGGGAGACTGATGTCTACAAGTGGGAACCTGAGGAATTGCCTGCGCAATCTGGACTGAAAACTGGAGATAGGCAATGGTTTTATTTCAGTCCTAGAGATAGGAAATACCCTAATGCTGCAAGGTCAAGTAGAGGAACAAGAAATGGGTACTGGAAAGCTACAGGAAAAGATCGTAATGTGACATACAGTTCCCGAGCCGTTGGAGTTAAGAAGACACTGGTTTTTTATAAAGGCAGAGCTCCTAATGGCGAGCGCACTGATTGGGTTATGCATGAATACACCTTGGATGAACAAGAACTTCAAAGATGCCCAGGCATTAAGGACTATTTTGCACTCTACAAGCTTTATAAGAAAAGTGGTCCTGGTCCTAAAAATGGCGAGCAGTATGGTGCACCATTTAACGAAGAAGAGTGGGCAGATGATGATTTTATAGATTGCAATGTAAACTCAGCTGAATGTGACGTTCCAATGCAGCAACATGATGGTGTTACTTCTGATGATACCGTCAATGTTAATGGTCCAGTGCAGCTGTCGCATGATGATGAAATTGAGGAGATCTTGAAGAAACTTTTAGATGATGAGTCTCTCCTTGAACAGCAAAATGTGAACAGTCATCCTGCCTTACCTTTGGGGGTTGCTGAGGAAATGCAGAACGGTGTGGTTGACCAATTCTGTAGGGAATTGGTGTTTCCTGAGCCATTTGAAATGTTTCACTCGAGTGGTGTTCAGCAATGTGGAGTGGGTCCCGGTTCTGACTTCCCTCAGTCAGCTATTTCTCACCTGCAAGTGTCTGAAGCTTCTGACGTCACTTGTATTCCCACCACAAAAGGAGCGGAAGCTGACTTATGTGTGAATGACTACTTGGAATTGGATGATCTCATTGGTCCTGAACATGCATTGCCAAATATCGATAAGCCTGTGGAGAACCTGCAGTTTGAAGATGGATTAAGTGAATTTGATCTGTACCATGATGCGCATATGTTTCTTCATGACATGGGGCCGGTTTCACATCCATTTATGAACACTCTGGACAGTGCTACTGTAGATCCAAATTATGAGCTGCTGTTGAATCAAGAAAATGCAAATGAAACCAGCGAATTCATGATGCATACTCAAAGAAACATCCTGCATTCAGCAGAACACATCAATGTTTCTACATCCTTGCCATCAACAGGTATATTATATGAATCTGCTTGCTTTCATTCTGAAAGCAATGGATCTCAAGAAAGCATTGGGGGAAGTGTTACTGCAAGTAAATTATCTTCTTCGCTCTGGAATTTTGTTGAGTCAATACCAACCACTCCTGCATCAGCATCTGAAAATGCTTTGGTGAATCGGGCCTTTGAGCGGTTGTCTAGCTTCAATAGGTTGAAGATTGGTGTCGCAGATTCAAACGTTGCTGCAGGTAATGACACTGCAATTATGAAGAGAGCAGGCAAAAAAGGGGTTATCTTCCTTTTCTTTCCAGTTCTTGTTGCCTTGTGTGCTTTCTTATGGGTTTCTTTAGGAACTTTAAGACTATTAGGTGTAACTAACTCATGA 1686 0.43 MGLESESECFSKMMASMPGFRFHPTDEELIMYYLKRKMSGKKLKLDVIRETDVYKWEPEELPAQSGLKTGDRQWFYFSPRDRKYPNAARSSRGTRNGYWKATGKDRNVTYSSRAVGVKKTLVFYKGRAPNGERTDWVMHEYTLDEQELQRCPGIKDYFALYKLYKKSGPGPKNGEQYGAPFNEEEWADDDFIDCNVNSAECDVPMQQHDGVTSDDTVNVNGPVQLSHDDEIEEILKKLLDDESLLEQQNVNSHPALPLGVAEEMQNGVVDQFCRELVFPEPFEMFHSSGVQQCGVGPGSDFPQSAISHLQVSEASDVTCIPTTKGAEADLCVNDYLELDDLIGPEHALPNIDKPVENLQFEDGLSEFDLYHDAHMFLHDMGPVSHPFMNTLDSATVDPNYELLLNQENANETSEFMMHTQRNILHSAEHINVSTSLPSTGILYESACFHSESNGSQESIGGSVTASKLSSSLWNFVESIPTTPASASENALVNRAFERLSSFNRLKIGVADSNVAAGNDTAIMKRAGKKGVIFLFFPVLVALCAFLWVSLGTLRLLGVTNS 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3553 561 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Mibi01g3553 561 Gene3D NAC domain 25 168 IPR036093 GO:0003677|GO:0006355
Mibi01g3553 561 SUPERFAMILY NAC domain 12 166 IPR036093 GO:0003677|GO:0006355
Mibi01g3553 561 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 229 - -
Mibi01g3553 561 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Mibi01g3553 561 FunFam NAC domain-containing protein 100-like 25 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3553 Mibi-ChrMibi01 61876984 61880046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3553 1 557 NAC Transcription Factor Family AT1G34190 41.876 2.41e-132 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi01g3553 NAM 8.6e-36 No_clan