Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3532 ATGGGCGGCCTCCATAATCCGACATTTTCTTCTCCGACCCTTTTCCTTCTCTCTCATCCCACCAACAACAGCTCTTCACCTTCTTCTTCGTCGTCTCCTTCTGTTTCTTCTTCTCTGTTACTTGGCCATGTCATTCCATTCACACATTGTTACAAATGGGGTCGTATTGATGCTGCGATCGGAACCCTAGAAAATTATGGGTTGCGTTCAAGCGAAGCCATCTGGGGATATGGCGAAATCAGAAGGCATCAGCTTGGGTCTGATAATGGGAACGAAGAAAGGGAAGCTAGCAGCAATCAGTGGGTGAAAGAGGGGAAGAAGAGAAATGCTTTGCTTGATGGTGAGAAATTGCCAAGGAAATCTTTTGATGATGAGATGGTTGATGGATGGCCCAGATGGCTAGTTGATAATGTTCCTCGAGAAGTTTTGGCTGGCTTGGTTCCTCGGACTGCTGATTCATACATATTGATTGACAAGGTGGGACAAGGAACCTACAGCAATGTTTATAAAGCAAGAGATCGGGCCACTGGAGAACTTGTGGCGCTTAAGAAGGTTCGCTTTGACAAGTCCCAGCCTGAGAGCATTAAATTTATGGCAAGAGAAATTATGATATTACAGAGATTGGATCACCCTAATGTCATGAAACTTAAGGGATTGGCTACATCAAGAATGCAATATAGTATTTATCTTGTTTTTGATTTCATGCAATCAGACATGACCAGAATAATATCTCGCCCTGAAGAAAGACTCACTGAACCACAGGTCAAGTGCTATATGCATCAATTGCTTTCAGGTCTGCAGCATTGCCATGATAGGGGCATTTTGCACCGAGATATTAAAGGTTCAAACCTCTTGGTTGATAAAAATGGGATGCTCAAGATTGCTGATTTTGGCCTTGCCAATTTTTATAATCCCAACTGTAGCCAATATCTCACAAACCGGGTTGTGACACTGTGGTACAGGGCTCCTGAGCTTTTGTTAGGTGCCACAAATTATGGAGTTGGTATTGATTTATGGAGTGTTGGATGTCTCTTGGCAGAAATGTTTAGGGGAATTCCAATCATGCCTGGAAGAACAGAGGTTGAGCAACTTCATATAATTTTCAGGCTATGTGGCACGCCATCAGAGGAGTATTGGAAGAAATTGAATCTTTCTACAACATTTAGACCTCCAAAATCTTACAGGCCCAGCCTAGCAGAATCTTTTAAGGATCTCCCTCCATCTTCTGTGGGCCTTTTGTGTACTCTGCTCACGTTGGATCCTGCATACCGTGGCACTGCATCCAAAGCTCTTCAAAATCATTTTTTCTTCACAAGCCCACCGGCATGTGACCTCTCTGGCCTGCCTGTAATCTATACAGAATTTGATGGGCAAAATCTTACCAATGAACAGATCAAGCACGCAAATTTTAAATTAAGACGATCTCATATCCATCATGAGAGTGAAAGGAAGAATCTAGCATCTGGCTGGCAAACAGATCATACTGCATCTTCTGAAGAGGAATTGAGCAAGAAAGTTGAGGCATATGTACCTGATGAAGAACAGGGAAGCATCCCCTGA 1560 0.4321 MGGLHNPTFSSPTLFLLSHPTNNSSSPSSSSSPSVSSSLLLGHVIPFTHCYKWGRIDAAIGTLENYGLRSSEAIWGYGEIRRHQLGSDNGNEEREASSNQWVKEGKKRNALLDGEKLPRKSFDDEMVDGWPRWLVDNVPREVLAGLVPRTADSYILIDKVGQGTYSNVYKARDRATGELVALKKVRFDKSQPESIKFMAREIMILQRLDHPNVMKLKGLATSRMQYSIYLVFDFMQSDMTRIISRPEERLTEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLVDKNGMLKIADFGLANFYNPNCSQYLTNRVVTLWYRAPELLLGATNYGVGIDLWSVGCLLAEMFRGIPIMPGRTEVEQLHIIFRLCGTPSEEYWKKLNLSTTFRPPKSYRPSLAESFKDLPPSSVGLLCTLLTLDPAYRGTASKALQNHFFFTSPPACDLSGLPVIYTEFDGQNLTNEQIKHANFKLRRSHIHHESERKNLASGWQTDHTASSEEELSKKVEAYVPDEEQGSIP 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3532 519 FunFam probable serine/threonine-protein kinase At1g54610 141 236 - -
Mibi01g3532 519 MobiDBLite consensus disorder prediction 497 511 - -
Mibi01g3532 519 PANTHER CELL DIVISION PROTEIN KINASE 152 440 - -
Mibi01g3532 519 SMART serkin_6 154 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3532 519 Gene3D Phosphorylase Kinase; domain 1 144 236 - -
Mibi01g3532 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Mibi01g3532 519 ProSitePatterns Protein kinases ATP-binding region signature. 160 183 IPR017441 GO:0005524
Mibi01g3532 519 SUPERFAMILY Protein kinase-like (PK-like) 148 440 IPR011009 -
Mibi01g3532 519 Gene3D Transferase(Phosphotransferase) domain 1 237 449 - -
Mibi01g3532 519 MobiDBLite consensus disorder prediction 482 519 - -
Mibi01g3532 519 Pfam Protein kinase domain 156 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3532 519 ProSiteProfiles Protein kinase domain profile. 154 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3532 519 CDD STKc_CDK9_like 154 436 - -
Mibi01g3532 519 FunFam Putative serine/threonine-protein kinase 237 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3532 Mibi-ChrMibi01 61662693 61668236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3532 149 479 Core Cell Cycle Gene Families AT5G10270 43.714 5.50e-94 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mibi01g3532 Pkinase 1.9e-65 CL0016