Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3529 ATGGATCCTTTTGATGGGGAGTTTCCTCAATATATACACTTAACGCAGAATGAATTTTTGAATAGAAGGCACATGAAGCAGAAGGAGGAGGATATTGCTATATGTGAATGCAAATATAATGCTAGTGACCCTGATAGTGCATGTGGGGAGGGGTGTCTCAACGTATTGACCAACAATGAATGCACCCTGGGCTATTGCCCATGTGGTGTCTTTTGCAAAAATCAGAGATTTCAGAAGTGCGAATATGCAAAAACAAGGTTGTTTAAAACTGAAGGCCGTGGATGGGGTCTTTTGGCTGATGAGAACATTCAGGCAGGTCGATTTATCATCGAATACTGTGGAGAAGTAATTTCATGGAAAGAAGCTAAGCGAAGATCCCATGCTTATGAAACTCAAGGTCTTAGGGATGCATTCATTATTTGTCTTAATGCCTCTGAATCCATCGATGCAACTAGAAAGGGAAGCCTTGGTAGATTTATAAATCATTCATGTCAGCCTAATTGCGAGACAAGGAAATGGAATGTCTTGGGTGAGATAAGAGTTGGAATATTTGCAAAACAAGATATACCTGTTGGAGCTGAACTGGCATATGATTATAATTTTGAATGGTTCGGCGGTGCAAAGGTTCGTTGCCTCTGTGGTGCAGCCAAATGTTCTGGATTCCTAGGAGCGAAATCTCGTGGTTTTCAGGAAGATACATATCTATGGGAAGATGATGATGAAAGGTACATTGTAGAGAAAATTCCAGTATATGACTCTGCAGAGGATGAACCTCCCTCAAAGGTCCTTAGAAACTCACATCCTGACATTCTTGGTATGCAAGTTAATGGAAAAACTGAACATGCCCTGGACGTTATCATAAAACCTGAACAATTATCAGAATCAACTGCTTTTAGCATTCAGCCACTTGGATCAGTTCCAGCAAAGGGTTTGCATGTCAAGTCGATAAAATCTGAAATGGAAAGTGATGATATGAAATTGTACTCTGGAGATACTCAGCGGGCCTTTCCGCAAAATAATGCAATGATATCACGGATCAGAAGCAATACTGCAGCTCGAAACTATCACATTGGACCCAGGTCCATATCTACCAAAAAATCAAAGAAATATAACAAAAGGTTTAAAAATATCACGCAGACACAAGTCGATGTGAAGTCTGCTGCTGAATCTTTAGCATCAAAAGAAGCACAAGAGGAGATTTTAAGATACGAGGAAATAAAGAATGAGGCGACTTGTGCTCTTGATAATTTGTACAATGAAATACGACCGGCCATTGAAGAACATGAGAGGGATAGCCAAGACAGTGTATCCACGAGTGTGGCAGAGAAGTGGATTGAAGCTAGCTGTTTGAAATTGAAGTCTGAGTTTGATCTTTACTCCTCCATTGTCCAAAATTTTGCCTGCACTCCTCCCAAGCCTCATGGACTTGCATCAAAACCTTCTCCTCAAGTTGATAATGAAAATGAAAATAAGTTGTTGACGAATTGA 1488 0.4026 MDPFDGEFPQYIHLTQNEFLNRRHMKQKEEDIAICECKYNASDPDSACGEGCLNVLTNNECTLGYCPCGVFCKNQRFQKCEYAKTRLFKTEGRGWGLLADENIQAGRFIIEYCGEVISWKEAKRRSHAYETQGLRDAFIICLNASESIDATRKGSLGRFINHSCQPNCETRKWNVLGEIRVGIFAKQDIPVGAELAYDYNFEWFGGAKVRCLCGAAKCSGFLGAKSRGFQEDTYLWEDDDERYIVEKIPVYDSAEDEPPSKVLRNSHPDILGMQVNGKTEHALDVIIKPEQLSESTAFSIQPLGSVPAKGLHVKSIKSEMESDDMKLYSGDTQRAFPQNNAMISRIRSNTAARNYHIGPRSISTKKSKKYNKRFKNITQTQVDVKSAAESLASKEAQEEILRYEEIKNEATCALDNLYNEIRPAIEEHERDSQDSVSTSVAEKWIEASCLKLKSEFDLYSSIVQNFACTPPKPHGLASKPSPQVDNENENKLLTN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3529 495 SMART PostSET_3 207 223 IPR003616 -
Mibi01g3529 495 FunFam Histone-lysine N-methyltransferase 1 235 - -
Mibi01g3529 495 ProSiteProfiles SET domain profile. 83 200 IPR001214 GO:0005515
Mibi01g3529 495 MobiDBLite consensus disorder prediction 481 495 - -
Mibi01g3529 495 SUPERFAMILY SET domain 9 220 IPR046341 -
Mibi01g3529 495 SMART shorttest3 30 82 IPR006560 GO:0005634|GO:0018024
Mibi01g3529 495 Coils Coil 393 420 - -
Mibi01g3529 495 PANTHER SET DOMAIN PROTEINS 8 450 - -
Mibi01g3529 495 SMART set_7 83 206 IPR001214 GO:0005515
Mibi01g3529 495 MobiDBLite consensus disorder prediction 472 495 - -
Mibi01g3529 495 Pfam SET domain 94 200 IPR001214 GO:0005515
Mibi01g3529 495 ProSiteProfiles AWS domain profile. 30 81 IPR006560 GO:0005634|GO:0018024
Mibi01g3529 495 Gene3D SET domain 4 236 IPR046341 -
Mibi01g3529 495 ProSiteProfiles Post-SET domain profile. 207 223 IPR003616 -
Mibi01g3529 495 Pfam AWS domain 43 80 IPR006560 GO:0005634|GO:0018024
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3529 Mibi-ChrMibi01 61609469 61614228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3529 65 222 C2H2 Transcription Factor Family AT2G23740 33.708 1.08e-20 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi01g3529 SET 2.9e-18 No_clan