Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3528 ATGGAGCCTGTGATGATTTCAGGAGGTTACGGAACCGCCGGAGAGTTGTCGGCCATGGTTTCGGCTCTTACGCATGTGGTCTCCTCAGGTTCTTCTGGACACCTAGCTACTAATAATAATGAATGGCTACAAGGAATTAATCATGCTTTTCATTTTCCTATGATGTCATCATCATCATCACCTTCACCTTTTCTCCATGTTTCTTCATCTCCTCCTCCTTCTTCTTCTTCACGCCCTGTTATGTCCTCTGCCTCTGGTTCTTGGTTAGGTCATAAAAGAGGCCGTCAAGAAGAAGAAGAAGCCGCCATTGGTGACTTCTCTGCACCATTATTACACAACCCGTCAGCTTCATCAGTGACGGAGCTGGAAGCTTTGAATATGGCCACCACTGATGCACCGGCGGCGGCGTTGCCGGCGGAGGGAACAGGGGAGAGGAGGAGGAGATACAGGGGAGTGAGGCAGAGGCCGTGGGGCAAATGGGCGGCGGAGATACGGGACCCACACAAGGCGGCCAGGGTCTGGCTCGGCACCTTCGACACGGCGGAGGCCGCCGCCAGAGCTTACGACGAAGCCGCATTGAGGTTCAGAGGGAGCAGAGCTAAATTAAACTTCCCCGAAAATGTCCGGGCGGTTCCGCCGCCGGTTCCCAATTTTCCGGCCACCGGAAACTTCTTCCCGCCGTCTCCGGCGGCGGCAGCGGCGTTTCCGTTCATGCAGGGGCCACCTGATTTGGTGAGAGACTATTTGAATTACTCTCAGTTGTTACAAAGCTCCGGCGACTTCCACGGTCAATTGCCGCCGGCGCCGGCGCAGCAGATTCCGGCGAGTTTGGTGCAGCAATGGCTATATAATTCTCAATTGAATGTTCTTCAATCTTCACAAGCATCATTGTCTTCTTCTTCTTCGTTATCTCCCAATGCATTTTCTCCTTCTAGTCAACTGTCCTCTGCTTCATTTCCCCTGCCTTCTTCTGGTCAGCAAATTGGCTATTTCCGGCCACCAGGAAATCAGACTCACGGCGGAGATGTCTTTTATTTTCCGACGACGTCAACATGGTCAGACGCCGGTAACTTTCCTCCGCCGTCTAGGTGA 1092 0.5302 MEPVMISGGYGTAGELSAMVSALTHVVSSGSSGHLATNNNEWLQGINHAFHFPMMSSSSSPSPFLHVSSSPPPSSSSRPVMSSASGSWLGHKRGRQEEEEAAIGDFSAPLLHNPSASSVTELEALNMATTDAPAAALPAEGTGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGSRAKLNFPENVRAVPPPVPNFPATGNFFPPSPAAAAAFPFMQGPPDLVRDYLNYSQLLQSSGDFHGQLPPAPAQQIPASLVQQWLYNSQLNVLQSSQASLSSSSSLSPNAFSPSSQLSSASFPLPSSGQQIGYFRPPGNQTHGGDVFYFPTTSTWSDAGNFPPPSR 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3528 363 MobiDBLite consensus disorder prediction 61 100 - -
Mibi01g3528 363 MobiDBLite consensus disorder prediction 342 363 - -
Mibi01g3528 363 Pfam AP2 domain 148 197 IPR001471 GO:0003700|GO:0006355
Mibi01g3528 363 PANTHER DNA-BINDING DOMAIN 107 296 IPR044808 GO:0003700|GO:0009873
Mibi01g3528 363 MobiDBLite consensus disorder prediction 339 363 - -
Mibi01g3528 363 MobiDBLite consensus disorder prediction 130 150 - -
Mibi01g3528 363 MobiDBLite consensus disorder prediction 61 84 - -
Mibi01g3528 363 SUPERFAMILY DNA-binding domain 148 206 IPR016177 GO:0003677
Mibi01g3528 363 CDD AP2 156 207 IPR001471 GO:0003700|GO:0006355
Mibi01g3528 363 FunFam Ethylene-responsive transcription factor 2 147 206 - -
Mibi01g3528 363 Gene3D AP2/ERF domain 147 207 IPR036955 GO:0003700|GO:0006355
Mibi01g3528 363 PRINTS Ethylene responsive element binding protein signature 171 187 IPR001471 GO:0003700|GO:0006355
Mibi01g3528 363 PRINTS Ethylene responsive element binding protein signature 149 160 IPR001471 GO:0003700|GO:0006355
Mibi01g3528 363 ProSiteProfiles AP2/ERF domain profile. 148 205 IPR001471 GO:0003700|GO:0006355
Mibi01g3528 363 SMART rav1_2 148 211 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3528 Mibi-ChrMibi01 61585071 61586623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3528 100 221 AP2-EREBP Transcription Factor Family AT2G33710 54.098 7.49e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi01g3528 AP2 7e-15 CL0081