Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3508 ATGGATGCCAAGTTCAGTGGAAGGCCGCTGCCGATGACGGTGGACCTGGAGCAGATGCCCGATGCCCCACAGCGTGGGCCCCACCACCGTAGGTCCCACTCGGACACCTCCTTCCGCATGGCGGCGGCCACGTTGGACGACCTCCTCCTCTTCGACCCCTCCGACCTCGACATCTCCACCCTCCCTTCCCCCGCCAACAACAACGCCCCCATGGATTTCGCCTCCAAGCCCTCCGATGAATCCGACGGCGGCAATCCACGCTCCCACATCAGGAGCTTGTCCATGGACTCCGATTTCTTCAACAGCCTTGGTGGTGGTGGTGGTGGTGGTGTTGATCATGGTTGCAAAGGTGGTGGTGGGGAGGAGAGAAGGCTGGTTGGTCATCACAGGCATAGCAATTCCATGGATGGCTCTTCTTCTTTCTCTTTTGAGGCTGATTCTTCCATGGCTATGGCTATTGATGGTGTTAAGAAGGCCATGGCCCCTGATAAGCTCGCTGAACTTGCCCTCTTTGATCCCAAGAGAGCTAGGAGGATTCTGGCTAATAGGCAATCTGCTGCGCGATCAAAGGAGAGGAAAGTTCGGTACACAAATGAACTGGAAAGGAAGGTGCAGACGCTTCAAAATGAAGCAACTAACCTCTCTGCTCAGGTTACTATGCTTCAGAGAGACACTACAGGGTTGACTAATGAGAATAAGGAGCTCAAACTGCGCTTGGAGGCCATGGAACAACAAGCGCAGCTTAGAGATGCGCTGAATGAAGCATTGAAGGAAGAACTGCAGCGCCTGAAGCTACAAAGTAGTCAATTAGCTGCCATGAATGGTAACCCTTCTTATGGTGGCTTTCTCTCTCAATTCGCTTCTCAGTTAGCATTACAACATCTTGGTAATCCTTCATCCCAGCAGTCTCAACAGCAATCACAGGTCTCATCGGCTGATCAGCAATTCAACGGCCAGCCCCGCTCGGACTTCTTGGATTTCAATGGCAAGAACTAG 996 0.5291 MDAKFSGRPLPMTVDLEQMPDAPQRGPHHRRSHSDTSFRMAAATLDDLLLFDPSDLDISTLPSPANNNAPMDFASKPSDESDGGNPRSHIRSLSMDSDFFNSLGGGGGGGVDHGCKGGGGEERRLVGHHRHSNSMDGSSSFSFEADSSMAMAIDGVKKAMAPDKLAELALFDPKRARRILANRQSAARSKERKVRYTNELERKVQTLQNEATNLSAQVTMLQRDTTGLTNENKELKLRLEAMEQQAQLRDALNEALKEELQRLKLQSSQLAAMNGNPSYGGFLSQFASQLALQHLGNPSSQQSQQQSQVSSADQQFNGQPRSDFLDFNGKN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3508 331 MobiDBLite consensus disorder prediction 110 139 - -
Mibi01g3508 331 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 22 315 - -
Mibi01g3508 331 SMART brlzneu 170 234 IPR004827 GO:0003700|GO:0006355
Mibi01g3508 331 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 172 235 IPR004827 GO:0003700|GO:0006355
Mibi01g3508 331 MobiDBLite consensus disorder prediction 61 92 - -
Mibi01g3508 331 FunFam Transcription factor VIP1 173 226 - -
Mibi01g3508 331 MobiDBLite consensus disorder prediction 294 324 - -
Mibi01g3508 331 Gene3D - 173 226 - -
Mibi01g3508 331 MobiDBLite consensus disorder prediction 22 36 - -
Mibi01g3508 331 MobiDBLite consensus disorder prediction 294 331 - -
Mibi01g3508 331 CDD bZIP_plant_RF2 175 224 IPR044759 GO:0003700|GO:0006355
Mibi01g3508 331 Pfam Basic region leucine zipper 172 223 IPR004827 GO:0003700|GO:0006355
Mibi01g3508 331 SUPERFAMILY Leucine zipper domain 174 229 IPR046347 GO:0003700|GO:0006355
Mibi01g3508 331 Coils Coil 190 273 - -
Mibi01g3508 331 MobiDBLite consensus disorder prediction 116 131 - -
Mibi01g3508 331 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3508 Mibi-ChrMibi01 61392354 61395268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3508 15 327 bZIP Transcription Factor Family AT1G43700 47.813 2.53e-81 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi01g3508 bZIP_2 1.9e-07 CL0018