Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3505 ATGGGTAGGAAGAAACCGACCGCCCGTGATGATGATAATGTGCCCACTGCTTCTCAAGGCGGTGGAAAGTCAAAGAAGAAGGGGCCAGTGATCGATGATGATGAGTATTCTATTGGAACGGAGCTATCTGAGGAACCAACGGCTGAGGAAGAGAAGCCTTTGGCGGCAGGAAAGAAGAAAGGTAAGAAAGGAAACTTGAAGGCTTCAAAAGCCGATGATGTAGATATGGTTGATAATGATGATGATGATGATGATGATGTGCCTGAAGTTGTGTTTACTGGGAAGAAGAAGGGGAAATCGAAAAAGGGTGGTGGGAGCAGTGTGTTTACTGCTTCAAGCTTTGGTTTGCTTGGTGATGAGGAGGGTGGAGAAGATGATGATGATGATGATGGTGATGAAGATAAACAATCCAGCTTAACTGATGGGGTGGACAATGATGACGACGAGGAACCGGTTGTCAGCTTTTTAGGTAAGAAGAAGTCCTCAAAGGGCTCCAAGAAGAAGGGTGGTAGCTTGTTCACTGCATCAGCTTTCGATGCCATAGACGCAGATGATGATGGGGAGGTGATTGATAATTCTATGGAAGCCAACCGTGAAGAGAATGATGACATGGACGAACCAGTTATTGCTTTTACAGGCAAGAAAAAATCATCGAAAAGTAGCAAGAATGCTGCTGCCTTATTCACAGCATCTAGTTTTGGTGATGTTGATGGAGAGCAGGACAAAATTGAACAAGATGGAGAAGAAGATGTTGCTCCGATAACTTTCTCAGGGAAGAAAAAGAAGTCGTCGAAGTCTTCCAAGAAGGCTGTTAATTCATTTAGTGCAGCTTTTGCTGAAGATGATGTGGATGATGATTCTCAGCTTGAGTCTAATAGAGCTGATGGAGATAATGCTGAGGACGAGGATGATTCTATCGTTGCGTTTTCAGGTAAAAAGAAGTCTTCTAAGAAAAAGAAGACTGCTATTTCCAAAGCTAGTGATGATTTTGAGTCTGTTAATGTAACTCAAGATGCTGTTGAGCTTGAGCAATCAAGCTCAATGGACAATGATAAAGGTAACAAGAGTGAAGAGGTGATTGAAACCTCAAAAAATAAAAAGAAGAAGAATAAAAAGAGTGGGAGGACTGCTCAAGAAGAGGAAGATTTGGACAAGCTTCTTGCTGAGCTTGGGGAGGCGCCCCCAGTAAAACCTGCTTCGCCTCCAGCAGAGGATGATAAAATTGAGGTGATGGAAAAAGAAGGGGAAGAAGAGACAATGGAATCAACTGCTGTAAAAAAGAAGAAGAAGAATAAAAAGAGTGGAAGAACTGCTCAAGAAGAGGAAGATCTGGACAAGCTTCTAGCTGAGCTTGGGGAGGGGCCTCCAGTAAAGTCTGCCCCCCCTCCAGCAGAGGATGATAAAGTTCAGGCTGCTTCTGCTGTGGTGGAAAAAGAAGGGGAAGAAGAGACGATGGAGTCAGCTGCAGCAAAAAAGAAGAAAAAGAAAAAAGAAAAGGAGAAGGAGAAGAAGGCTGTTGCAGCCGCGGCTGCTGCGAGTGCCCCTGAGAATGAAAAGACTGAAGAAGTTAAACCTGAGGCATCTGAATCAAAGAAGAATGATTCCAAGACTAAAGCGGCTGACAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAAGAGGCGCTGGCTCGAAGAAAAGAGGCCGAAGAGAGGAAGAAAAGGGAAGAGGAGGAGAGGTTGAGGAAGGAAGAAGAAGAGCGCCGTAAGCAAGAGGAACTTGAGAGGCAAGCAGAAGAGGCAAGACGTAGGAAGAAGGAAAGGGAGAAGGAGAAGCTCCAGAAGAAAAAGCAAGAAGGCAAATTGTTAACTGGTAAGCAAAAGGAAGAAGCTCGTCGTTTGGAGGCCATGAGGAAGCAGTTTCTTGCTGGTACCGGGAGTGTCACTCTTCCTACTGGGGACTCTGCTGCACCAGCCAAACGACCAATATATCAGACAAAGAAGTCAAAACAAACCCATCTTCATCAGAATGGCACTGCCCCTGTTAAGGCAACTGAAGATGTGGAGGCAAAGGAAAATCTGGAGACCCCTCCTGATGCAGAGGCATTCGAATCTGAGAAGGTTGAAGTGGCTGAGTCAGTGCAGGTTGAGGACAAAGGTAAACCTTCTGAAGATGTTGAAGAAGATGAAGTTGAAGAAGAAGAGGAGGAGGATGAGGAAGAATGGGATGCAAAGAGTTGGGATGATGTTAATTTAAATGGAAAGGGTGCATTTGCTGATGAGGAGGAAGACTCTGAACCAGAACCTGTAGTGAAAAAGGAGATAAAAAATGCTGCACCTCTGGCTGTTGTCAGGTCAACAGTTACAGCTAAGAAAGCAGCTTCTCATCCTCCAACTGAGCAAATTGAAAGTAAAAAGCAGGTTGAGAAGCAACCAGCAAAGAAGGATGGGCTGCTACCACCCCATTCAGCTGGGCCTTCTCAGTCAAGTGGAGAGAATCTTCGCTCCCCAATTTGCTGTATTATGGGCCATGTGGATGCAGGCAAAACTAAGCTGCTGGATTGTATCCGATGTACTAATGTTCAGGAAGGTGAGGCTGGTGGCATCACGCAACAGATTGGTGCTACATACTTCCCTGCTGAGAACATACGTGAAAGAACAAAGGAGCTAAAAGCTGATGCCAAGCTGAAAGTTCCTGGTCTACTTGTGATAGACACTCCTGGGCATGAATCGTTTACTAACTTAAGGTCAAGGGGTTCTGGTCTCTGTGATATTGCAATTCTAGTTGTTGACATTATGCATGGATTGGAACAACAGACAATAGAATCACTCAATCTATTGAAGAGTAGGAATACGGAATTCATAGTTGCATTGAACAAAGTTGACAGACTTTATGGTTGGAAAGTACACCGCAATTCTCCAATTGTTAAGGCAATGAAACAGCAAACCAAGGATGTGCAAAATGAGTTTAACATGAGAGTTACTCAGATTGTCACTCAATTCAAGGAACAGGGGCTAAACACTGAATTGTACTATAAAAATAAAGAAATGGGAGAAACTTTCAGTATGGTACCTACTAGTGCTGTAAGTGGTGAAGGTATCCCAGATTTGTTATTGTTGTTGGTTCAATGGGCACAAAAAACAATGGCTCAGAAACTTACATATAATGATGAAGTGCAGTGTACAGTTTTGGAGGTTAAGGTTGTTGAAGGTCATGGGACAACTATTGATGTTGTCTTGGTTAATGGTGTTCTTCATGAAGGAGATCAAATAGTTGTATGTGGAATGCAGGGACCCATTGTTACTACAATTCGAGCTCTATTGACACCTCATCCTATGAAGGAGCTCCGTGTTAAGGGCACGTATATCCATCATAAAGAAATTAAGGCTGCTATGGGTATCAAAATCACTGCCCAGGGCCTTGAACATGCTATTGCTGGCACTGCTTTATATGTGGTAAAGCCTGATGATGATTTAGAAGGTGTCAAAGAATTAGCTATGGATGATATTGAGCAAGTAATGAGCAGGATTGACAAGAGTGGTGAGGGAGTTTGGGTACAGGCATCGACCCTTGGTTCTTTGGAAGCGTTGCTGGAGTTTTTGAAAACACCAGAAGTGAATATTCCTGTTAGTGGTATGAGCATAGGCCCTGTACACAAAAAAGATGTAATGAAGGCCAGTGTAATGCTTGAAAAGAAAAGAGAGTATGCCACTATCTTGGCTTTTGATGTCAAAGTTAATCAGGAGGCTAAAGATCTTGCGGAAGAACTAGGTGTGAAAATTTTTATGGCTGATATCATTTATCACCTATTTGACCAATTCAAGGCCTATATTGACAACATTAAGGAGGAAAAGAAGAAAGAAGCAGCTGATGAGGCAGTCTTCCCATGTGTTATGAAAATCTTACCACGTTGCGTTTTCAACAAGAAAGATCCAATTGTTTTGGGAGTTGATATTCTTGAAGGTGTTTTAAAGGTTGGGACTCCAATTTGTATTCCTTCCAGAGATTACATCGATATTGGTCGCATTGCGTCCATTGAAAATAACAAAAAACCTGTTGATTATGCCAAGAAAGGGCAGCAAGTGGCCATTAAGATTGTTGGCAGCAATCCTGAGGAACAACAAAAAATGTTTGGGAGGCATTTTGAGATTGATGATGAACTTGTAAGCCATATCTCAAGGAGATCTATCGACATTCTTAAAGCTAATTATCGGGATGAACTAAGTATGGATGAATGGAAGCTGGTTGCAAAATTGAAAAATGTTTTCAAGATACAATGA 4257 0.428 MGRKKPTARDDDNVPTASQGGGKSKKKGPVIDDDEYSIGTELSEEPTAEEEKPLAAGKKKGKKGNLKASKADDVDMVDNDDDDDDDVPEVVFTGKKKGKSKKGGGSSVFTASSFGLLGDEEGGEDDDDDDGDEDKQSSLTDGVDNDDDEEPVVSFLGKKKSSKGSKKKGGSLFTASAFDAIDADDDGEVIDNSMEANREENDDMDEPVIAFTGKKKSSKSSKNAAALFTASSFGDVDGEQDKIEQDGEEDVAPITFSGKKKKSSKSSKKAVNSFSAAFAEDDVDDDSQLESNRADGDNAEDEDDSIVAFSGKKKSSKKKKTAISKASDDFESVNVTQDAVELEQSSSMDNDKGNKSEEVIETSKNKKKKNKKSGRTAQEEEDLDKLLAELGEAPPVKPASPPAEDDKIEVMEKEGEEETMESTAVKKKKKNKKSGRTAQEEEDLDKLLAELGEGPPVKSAPPPAEDDKVQAASAVVEKEGEEETMESAAAKKKKKKKEKEKEKKAVAAAAAASAPENEKTEEVKPEASESKKNDSKTKAADKKVPKHVREMQEALARRKEAEERKKREEEERLRKEEEERRKQEELERQAEEARRRKKEREKEKLQKKKQEGKLLTGKQKEEARRLEAMRKQFLAGTGSVTLPTGDSAAPAKRPIYQTKKSKQTHLHQNGTAPVKATEDVEAKENLETPPDAEAFESEKVEVAESVQVEDKGKPSEDVEEDEVEEEEEEDEEEWDAKSWDDVNLNGKGAFADEEEDSEPEPVVKKEIKNAAPLAVVRSTVTAKKAASHPPTEQIESKKQVEKQPAKKDGLLPPHSAGPSQSSGENLRSPICCIMGHVDAGKTKLLDCIRCTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEQQTIESLNLLKSRNTEFIVALNKVDRLYGWKVHRNSPIVKAMKQQTKDVQNEFNMRVTQIVTQFKEQGLNTELYYKNKEMGETFSMVPTSAVSGEGIPDLLLLLVQWAQKTMAQKLTYNDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYIHHKEIKAAMGIKITAQGLEHAIAGTALYVVKPDDDLEGVKELAMDDIEQVMSRIDKSGEGVWVQASTLGSLEALLEFLKTPEVNIPVSGMSIGPVHKKDVMKASVMLEKKREYATILAFDVKVNQEAKDLAEELGVKIFMADIIYHLFDQFKAYIDNIKEEKKKEAADEAVFPCVMKILPRCVFNKKDPIVLGVDILEGVLKVGTPICIPSRDYIDIGRIASIENNKKPVDYAKKGQQVAIKIVGSNPEEQQKMFGRHFEIDDELVSHISRRSIDILKANYRDELSMDEWKLVAKLKNVFKIQ 1418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3505 1418 CDD aeIF5B_II 1050 1160 - -
Mibi01g3505 1418 MobiDBLite consensus disorder prediction 747 765 - -
Mibi01g3505 1418 Coils Coil 544 615 - -
Mibi01g3505 1418 MobiDBLite consensus disorder prediction 348 365 - -
Mibi01g3505 1418 MobiDBLite consensus disorder prediction 373 388 - -
Mibi01g3505 1418 SUPERFAMILY Translation proteins 1285 1417 IPR009000 -
Mibi01g3505 1418 MobiDBLite consensus disorder prediction 471 493 - -
Mibi01g3505 1418 Coils Coil 478 509 - -
Mibi01g3505 1418 MobiDBLite consensus disorder prediction 715 737 - -
Mibi01g3505 1418 FunFam Eukaryotic translation initiation factor 5B 1168 1274 - -
Mibi01g3505 1418 MobiDBLite consensus disorder prediction 191 212 - -
Mibi01g3505 1418 FunFam Eukaryotic translation initiation factor 5B 1281 1418 - -
Mibi01g3505 1418 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1151 1280 IPR036925 -
Mibi01g3505 1418 Gene3D Translation factors 1281 1418 - -
Mibi01g3505 1418 Pfam Elongation factor Tu domain 2 1065 1143 IPR004161 GO:0005525
Mibi01g3505 1418 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 491 1414 IPR015760 -
Mibi01g3505 1418 FunFam Eukaryotic translation initiation factor 5B 820 1048 - -
Mibi01g3505 1418 MobiDBLite consensus disorder prediction 183 766 - -
Mibi01g3505 1418 MobiDBLite consensus disorder prediction 780 824 - -
Mibi01g3505 1418 MobiDBLite consensus disorder prediction 677 714 - -
Mibi01g3505 1418 Pfam Translation-initiation factor 2 1158 1267 IPR023115 -
Mibi01g3505 1418 Gene3D Translation factors 1049 1169 - -
Mibi01g3505 1418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 827 1117 IPR027417 -
Mibi01g3505 1418 MobiDBLite consensus disorder prediction 214 228 - -
Mibi01g3505 1418 MobiDBLite consensus disorder prediction 402 425 - -
Mibi01g3505 1418 MobiDBLite consensus disorder prediction 119 135 - -
Mibi01g3505 1418 CDD IF2_eIF5B 829 1039 - -
Mibi01g3505 1418 MobiDBLite consensus disorder prediction 517 629 - -
Mibi01g3505 1418 MobiDBLite consensus disorder prediction 1 170 - -
Mibi01g3505 1418 CDD IF2_aeIF5B_IV 1289 1384 - -
Mibi01g3505 1418 FunFam eukaryotic translation initiation factor 5B 1049 1168 - -
Mibi01g3505 1418 MobiDBLite consensus disorder prediction 434 449 - -
Mibi01g3505 1418 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 826 1044 IPR000795 GO:0003924|GO:0005525
Mibi01g3505 1418 Gene3D - 1170 1274 IPR036925 -
Mibi01g3505 1418 Pfam Elongation factor Tu GTP binding domain 830 1038 IPR000795 GO:0003924|GO:0005525
Mibi01g3505 1418 TIGRFAM small_GTP: small GTP-binding protein domain 831 956 IPR005225 GO:0005525
Mibi01g3505 1418 MobiDBLite consensus disorder prediction 790 808 - -
Mibi01g3505 1418 PRINTS GTP-binding elongation factor signature 910 921 IPR000795 GO:0003924|GO:0005525
Mibi01g3505 1418 PRINTS GTP-binding elongation factor signature 946 955 IPR000795 GO:0003924|GO:0005525
Mibi01g3505 1418 PRINTS GTP-binding elongation factor signature 830 843 IPR000795 GO:0003924|GO:0005525
Mibi01g3505 1418 PRINTS GTP-binding elongation factor signature 894 904 IPR000795 GO:0003924|GO:0005525
Mibi01g3505 1418 Gene3D - 820 1048 IPR027417 -
Mibi01g3505 1418 MobiDBLite consensus disorder prediction 327 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3505 Mibi-ChrMibi01 61361801 61369320 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3505 1 42 Eukaryotic Initiation Factors Gene Family AT1G76810 67.391 5.16e-07 52.8