Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3501 ATGCTGGGGGACTCAACGGCGTTAGGAGGCGGCGGAGCTACTAGCTCAGGCGATGATGTGGCGGCGGGGGCTGCGGGAGGTGGAGTTGACGGTGGTGAGTCTGCGGCTGCGGCGGCTGGTAGCGGCGGTGGTGGATCGAATTCTGGGGAAGAAGGCGGCGGCGGAGGCGGCGGGAGCTTCGGGGGAAACCGGTGGCCCCGCCAGGAGACTCTAGCGCTGTTGAAGATACGGTCTGATATGGATGTTGCTTTTCGAGATGCCAATGTTAAGGGTCCCTTGTGGGATGAGGTTTCCAGGAAGCTAGGAGAGCTTGGATATCAAAGAAGTGCAAAGAAATGCAAGGAGAAATTCGAGAACGTTTACAAGTACCACAAGCGAACCAAAGATGGAAGAACCGGGAAACCATACGGCAAAACATACCGTTTCTTCGATCAACTAGAAGCTCTCGATCATCACCACCACCACCAACAACAACAACATCATCATCAAAACACCAATCCTAATTTATTCATTCAATCCTCTTCCTCTAATAACAATTCCACCCCTCCTTTACCCGCACCACCCGTCTCCGTCATACCCACCACCCACCACCCTCCTCCGCCGCCACTCATGGCGGCGCAGCAAGTAACGCCATCATCGCAGCCCTTGCCTCCTCTTATGAATGCAGCAGCCAGCACTGTTCCATCAATGAACACTGCTACCACTACTACAACTGTAAATCCCACTAGTTTTTCGGTTCCTCCTCCTCCATTGGCTATGCCAACAAACCCTACGTTTAATATGCAATCATTCGCGAGCATCCCGGCGGATCTGCTGTCGAATTCGAGCTCGTCGTCGACATCGTCAGACGAGACGATAGAGGCGAGACGGAGGAGGAAGAGGAAGTGGAGGGACTTCTTTGAGAGGCTGATGAAGGAGGTGATAGAGAAGCAGGAGGAGCTTCAGAAGAGGTTCCTAGAAGCCATAGAGAAACGTGAGCATGAGAGGATGGTAAGAGAGGAATCATGGAGAATGCAGGAGATGGCCAGAATCAACAAGGAGCGAGAAATCTTAACCCAAGAAAGATCCATCGCCGCCGCCAAAGACGCCGCCGTCATGGCCTTCCTCCAAAAAATCGCCGAACAACAAAATCTAGCCCAATCACCACCACCACAACCACCACCACAAACAACAACAACAAATAACATCCCCATTCCTCCGACGTTGGCTCCGGCACCAGCACCAGCACCAGTAATTGCACCGCAACCCGTGACGGTGCAACAACCGAATCCCATTCTCTCTACCCCACCGGCTCAGGCTCAGGCTCAGGCTCAGGCTTTGGTAACGAGCATGGAAATTGTGGGGAAGACTGACAATGGGGATAATAACAGTAGCATGATGGTGGCGGCAGGGACGCCGGCGGGGGCATCTTCGTCACGGTGGCCGAAGGTGGAGGTGGAGACGCTGATAAAGTTGAGGACAGACTTGGAGATGAAGTATCAGGAGAATGGGCCAAAGGGGCCATTATGGGAGGAGATATCAGGGGCAATGAGGAGGTTGGGATATAACAGGAGCTCCAAGAGATGCAAGGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAGGTCAAAGAAAGCAACAAGAGGAGACCAGAAGACTCCAAGACATGCCCCTACTTCCACCAGCTTGATGCTCTATATAGGGAGAAGAGTTTCAGAATGCAGTCATCAGCTCCGCCGCCACAGCAACAACCGCCGCAAATTCCGCCGCCGGAGAGCATGATGTCGACGCCGCTGATGGTGCGGCCGGAGCAGCAGTGGCCGCCGCAGCAGCAAGATACACGGCAGCTGCCGCCGCCGGTGATGATGGAGGAAGATGAAGAGGAAGAGAAAGATAGAGAGGAGGAGGATGAAGGAGAAGATGATGATGATGAGGATGATGATGATGGAGGAAGTGGTGCTTATGAGATAGTGGCAAGCAAGCCAGCTACATCAGTGGGTGCTTCTGAGGTTGTCGGAGTGCGGCGGAGGATACGGCGGAGGAGGAGGAGGAGGAGGTGGGTAGGGGAGAATGACACATGGGCATGGAGGTGGGGAAGAGTTATTGGTACTTTGGTGGTGCTCTCTTGCAGCCTATAG 2118 0.5368 MLGDSTALGGGGATSSGDDVAAGAAGGGVDGGESAAAAAGSGGGGSNSGEEGGGGGGGSFGGNRWPRQETLALLKIRSDMDVAFRDANVKGPLWDEVSRKLGELGYQRSAKKCKEKFENVYKYHKRTKDGRTGKPYGKTYRFFDQLEALDHHHHHQQQQHHHQNTNPNLFIQSSSSNNNSTPPLPAPPVSVIPTTHHPPPPPLMAAQQVTPSSQPLPPLMNAAASTVPSMNTATTTTTVNPTSFSVPPPPLAMPTNPTFNMQSFASIPADLLSNSSSSSTSSDETIEARRRRKRKWRDFFERLMKEVIEKQEELQKRFLEAIEKREHERMVREESWRMQEMARINKEREILTQERSIAAAKDAAVMAFLQKIAEQQNLAQSPPPQPPPQTTTTNNIPIPPTLAPAPAPAPVIAPQPVTVQQPNPILSTPPAQAQAQAQALVTSMEIVGKTDNGDNNSSMMVAAGTPAGASSSRWPKVEVETLIKLRTDLEMKYQENGPKGPLWEEISGAMRRLGYNRSSKRCKEKWENINKYFKKVKESNKRRPEDSKTCPYFHQLDALYREKSFRMQSSAPPPQQQPPQIPPPESMMSTPLMVRPEQQWPPQQQDTRQLPPPVMMEEDEEEEKDREEEDEGEDDDDEDDDDGGSGAYEIVASKPATSVGASEVVGVRRRIRRRRRRRRWVGENDTWAWRWGRVIGTLVVLSCSL 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3501 705 MobiDBLite consensus disorder prediction 616 645 - -
Mibi01g3501 705 ProSiteProfiles Myb-like domain profile. 63 121 IPR001005 -
Mibi01g3501 705 MobiDBLite consensus disorder prediction 161 180 - -
Mibi01g3501 705 ProSiteProfiles Myb-like domain profile. 466 530 IPR001005 -
Mibi01g3501 705 MobiDBLite consensus disorder prediction 271 291 - -
Mibi01g3501 705 MobiDBLite consensus disorder prediction 380 415 - -
Mibi01g3501 705 Gene3D - 474 535 - -
Mibi01g3501 705 Gene3D - 65 126 - -
Mibi01g3501 705 MobiDBLite consensus disorder prediction 377 415 - -
Mibi01g3501 705 SMART sant 470 532 IPR001005 -
Mibi01g3501 705 SMART sant 61 123 IPR001005 -
Mibi01g3501 705 MobiDBLite consensus disorder prediction 1 64 - -
Mibi01g3501 705 MobiDBLite consensus disorder prediction 151 199 - -
Mibi01g3501 705 FunFam Trihelix transcription factor GT-2 65 126 - -
Mibi01g3501 705 Coils Coil 297 324 - -
Mibi01g3501 705 Pfam Myb/SANT-like DNA-binding domain 472 559 IPR044822 -
Mibi01g3501 705 Pfam Myb/SANT-like DNA-binding domain 63 149 IPR044822 -
Mibi01g3501 705 MobiDBLite consensus disorder prediction 566 659 - -
Mibi01g3501 705 CDD GT1 472 537 - -
Mibi01g3501 705 FunFam Trihelix transcription factor GT-2 474 535 - -
Mibi01g3501 705 PANTHER FI21293P1 31 626 - -
Mibi01g3501 705 MobiDBLite consensus disorder prediction 181 199 - -
Mibi01g3501 705 MobiDBLite consensus disorder prediction 572 586 - -
Mibi01g3501 705 CDD GT1 63 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3501 Mibi-ChrMibi01 61319115 61322170 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3501 60 600 Trihelix Transcription Factor Family AT1G76880 52.166 1.17e-155 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mibi01g3501 Myb_DNA-bind_4 5.4e-22 CL0123