Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3500 ATGATCAAGAGCGTTGAAGATATTCATGTGAGGGGTGATTTAGTAATTTCAGACTCCCCCAACATTCAGCAATTACCAAAGCTGACCTGCAGAGATGGCTGGGCCACAACTTGTTATCAACATCGAGTATTCACCTTGTTTTCTGATTATTCTTTTCTCTCTTCATCAGCTGTAATTGCTTACACACAACTTCCCTCTCTCTCCATAAGATCCAAGTGTGTTATTAGAGAGACTTGCTCCGGCGAGCCCATGATGGCCACCGTGACGGCGACAGGTGAAGCCGCCGTGGCCTGCGACGGTGGTGCAGAAATAGACATGATGATGGATAGTATTGTTGGTATGGATGCGGCCAATAATTCAGGTGATGATATTCATTTCAAGAGAAGTGGAGGAGGCAACCGGTGGCCTCGTCAAGAAACTTTTGCTTTGTTGAAGATAAGGTCAGATATGGATGCTGTGTTTCGGGATTCCAGTCTTAAAGGTCCACTTTGGGAACAGGTTTCAAGGAAAATGGCAGAACTTGGATATAATCGAAGCTCAAAGAAGTGCAAAGAAAAGTTCGAGAACGTGTACAAGTACCACAAGAGAACCAAAGAAAGCCGAAGTGGTAAATCAGAAGGCAAAACCTACAAATTCTTTGATCAACTACAAGCCCTTGAAAATAAATTCACCCTCTCTCCATCAAAACCACCACCTCCTCCACCTCCTACACATCCTCAACCTTCTCTCCAAACATGGCCTAACAACATTAACACTAACAACAACAATAATAATAATGATCCTACTCCTCCCACAACTACTATCTCTTACATCACTACTACTATTCCATCCATTATAAACCCTACTCTCATTTCTCCTCCTCCTCCTCCACCTAATATTGTTGCTGCTGCTGCTACCACAAACAACAACAACAACCCTAGGAATTTGTCAAACAAGAGTCTTTTCTCGTCGATCACCACCACGTCGACCTCATCGTCGACGGCTTCTGACGAGGACATGGAGGAGAAGTACAGGAAGAAGAGAAAGATGAAGGACTATTTCAGGAGGCTAACAAGGCAAGTGCTGGCAAAGCAAGAGGAGATGCAAAAGAGGTTTCTAGAAGCCATAGAGAAGAGAGAACGTGAGAGAGAAGCACAATTAGAAGCTTGGAGAGCCCAAGAAATGGCCAGAATCAATAGAGAACATGACATCCTTGTCCAAGAAAGATCCACCGCCGCAGCCAAAGACGCCGCCGTCATCGCCTTCCTCCAGAAGTTATCAGGCCAGTCAAACCCAGCCCCACCACCTCCACCTCCTCCGGCCCCACCACAACAAAAACAACCTCATGAACAACTCCAATTGATGCCTATTGACAACAAGTTTGAAATGCACAAAGTGATCAACATGAACAATGGCCATGAGAATAATCATAATAATGTTTCTTCTTCTGGTTCTTCTTCAAGGTGGCCCAAGGCAGAAGTGCATGCATTGATAAGGCTGAGGACGAGTATGGATCCGAAGTATCAAGAGAATGGGCCGAAAGGACCATTGTGGGAGGATATATCGTTGGCAATGCAGAGGCTAGGGTATAATAGGAGTTCAAAGAGGTGCAAGGAGAAATGGGAGAACATAAACAAGTACTTCAAGAAAGTGAAGGAGAGTAACAAGCAAAGGCGTGAGGATAGCAAGACTTGTCCTTATTTTCATGAGCTTGAAGCTCTTTACAAAGACAAGAGTACCAAAACCAACAACAACACTACTAATAGTATCGCCTTCGGAGTAGCCGGCGCCGGAGATCATGATGAGATGATGATGGAGCCGTTGATGGTGCAGCCGGAGCAGCAATGGAGGCCGCCGCAGCCGCCGCATGCGGAGGAGAATAATAATGTGAATATGTTTAGGTATGAAGGGAAAGACATGGAGGTTGATGACGATGATGATGATGATGATGATGATGCTGGGGAAGAGGATGATGAAGATAGTATGGAGGAAGAAGAAGGTAATGGAGATGGTTATGAAGTTGCAGGGACGAATAGTAATAAGATTGCTTCAGTGGATACTGTTGAATGA 2049 0.449 MIKSVEDIHVRGDLVISDSPNIQQLPKLTCRDGWATTCYQHRVFTLFSDYSFLSSSAVIAYTQLPSLSIRSKCVIRETCSGEPMMATVTATGEAAVACDGGAEIDMMMDSIVGMDAANNSGDDIHFKRSGGGNRWPRQETFALLKIRSDMDAVFRDSSLKGPLWEQVSRKMAELGYNRSSKKCKEKFENVYKYHKRTKESRSGKSEGKTYKFFDQLQALENKFTLSPSKPPPPPPPTHPQPSLQTWPNNINTNNNNNNNDPTPPTTTISYITTTIPSIINPTLISPPPPPPNIVAAAATTNNNNNPRNLSNKSLFSSITTTSTSSSTASDEDMEEKYRKKRKMKDYFRRLTRQVLAKQEEMQKRFLEAIEKREREREAQLEAWRAQEMARINREHDILVQERSTAAAKDAAVIAFLQKLSGQSNPAPPPPPPPAPPQQKQPHEQLQLMPIDNKFEMHKVINMNNGHENNHNNVSSSGSSSRWPKAEVHALIRLRTSMDPKYQENGPKGPLWEDISLAMQRLGYNRSSKRCKEKWENINKYFKKVKESNKQRREDSKTCPYFHELEALYKDKSTKTNNNTTNSIAFGVAGAGDHDEMMMEPLMVQPEQQWRPPQPPHAEENNNVNMFRYEGKDMEVDDDDDDDDDDAGEEDDEDSMEEEEGNGDGYEVAGTNSNKIASVDTVE 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3500 682 SMART sant 478 540 IPR001005 -
Mibi01g3500 682 SMART sant 131 193 IPR001005 -
Mibi01g3500 682 Gene3D - 482 543 - -
Mibi01g3500 682 Gene3D - 135 196 - -
Mibi01g3500 682 MobiDBLite consensus disorder prediction 633 663 - -
Mibi01g3500 682 MobiDBLite consensus disorder prediction 243 266 - -
Mibi01g3500 682 CDD GT1 133 198 - -
Mibi01g3500 682 MobiDBLite consensus disorder prediction 420 442 - -
Mibi01g3500 682 MobiDBLite consensus disorder prediction 223 266 - -
Mibi01g3500 682 FunFam Trihelix transcription factor GT-2 135 196 - -
Mibi01g3500 682 PANTHER FI21293P1 121 619 - -
Mibi01g3500 682 Coils Coil 355 386 - -
Mibi01g3500 682 ProSiteProfiles Myb-like domain profile. 474 538 IPR001005 -
Mibi01g3500 682 CDD GT1 481 545 - -
Mibi01g3500 682 Pfam Myb/SANT-like DNA-binding domain 480 567 IPR044822 -
Mibi01g3500 682 Pfam Myb/SANT-like DNA-binding domain 133 219 IPR044822 -
Mibi01g3500 682 MobiDBLite consensus disorder prediction 606 682 - -
Mibi01g3500 682 MobiDBLite consensus disorder prediction 297 336 - -
Mibi01g3500 682 MobiDBLite consensus disorder prediction 226 242 - -
Mibi01g3500 682 MobiDBLite consensus disorder prediction 423 439 - -
Mibi01g3500 682 MobiDBLite consensus disorder prediction 666 682 - -
Mibi01g3500 682 MobiDBLite consensus disorder prediction 297 328 - -
Mibi01g3500 682 FunFam Trihelix transcription factor GT-2 482 543 - -
Mibi01g3500 682 ProSiteProfiles Myb-like domain profile. 133 191 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3500 Mibi-ChrMibi01 61292380 61295759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3500 130 608 Trihelix Transcription Factor Family AT1G76890 49.299 1.87e-135 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mibi01g3500 Myb_DNA-bind_4 5e-21 CL0123