Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3491 ATGCATGATCGTCGCGAGGTTGAAACACAGAATTTGAAACGCCATAATGACTCTTATGATGATAAAGCAATTGTTGGGTTTGACGTGGAGTGGTCAACGGTTGATGATGAAGTCAACCCACGAGCTTCTTTGCTGAAACTTGGAAGCAGGAATGGATGCCTTTTGGTGAAGCTGGACTACAAGTCAAAGTTGGTGCACTATTCTCTTAGGCATTTCTTTCTAGCGAAGAGCATTAGGCGTTATGTGAATAATGGTTTGCTCGGTTTTAAAATGGGTCCTGTCGATGCGCAGGATGATTATGCTGGGATACCAAAGGAATATAGGCTATACAGCCACAAGATGCCCGATGGTTGCAAGGTTGAAACGCAGGTAATGTTTGCAGATTATACAGACTTTTGGATATTCCTTAGATACAGGGTAGAGGAGATGTTTGGAAATGAAAGTGAAGGTATGGCTATTGTGGGGTTTGACGTGGAGTGGTCAATGGTTAATGGTGAGGTCAAAGCTTCTTTTCTGAATCTAGGAAACAGCCATAGATGCTTTCTGGTGAAGTTGGGCATGTCGATGGACAATGTTCTGAAGCAATTTTTGCTCATTAAGAACATTACTTTTGTGGGGATTCATATCAAAGAGGATCTTATCAAACTAAAGCGTGATCATGGAATAGTGATACGAAACGTGGTTGATCTTGCTCATTTGAATAAGTGTGATATGGTGGGGTCTTCTAGTTTGCTTTATCCTCCACGTCCTGCTTGCACCTTATCATGTTTGGCGGCGGATCGTTTGCTTGAGTCTCATACACGAGAAGAACAAGGGGACACGTCATCTCAGGGACATAAATCCCAACTGCTAAGAGCTCGCCACGTGGTATGGCATCAAGCCAGCACGTGGCCTAGAGGAGTCAAAGATCCTCTCTGCAAATTTTTCTCTTCCATTTTCCCTCTCTTTCAACACCCACATAGGGAGGGAGAGAGAAAGAGAGAGACAGCTATGGATTTCTTCATTGAAGGTGTGGGGGAGAGTTCCTCTCCTCCACGAACCTCAGGTGGTTTCGGAAACTACGATGTGAGGAACGATGTTTATAATCGCTTAGTTGAAAACGGCCATGGCCAAGAAGAAGAGGATTTTCGTGAGCTGCTAGACTCTCACTTCAATCGATTGCCTCAAAGTTATTTGCTTGATGTTAACATAGACAGAGCTGAAGACGTTTTATTACATCAGAAACTTCTTGCTTTGGCTAGGGACCCCAGCAAGCGCCCTGTCTACAATATACGCTTTTTGGAGCACATTTCTACTAGAGTGGATGGTCAAGATCAACAAATTGTAAGTGTTCATTCTAACGCAAGGCCGTCTTCTCCTACATCTAATGGGGAAGCTGCATCATCTCATAAGAGGGCAAGAGACTGTGCAGCTGAGTTTGAGCCTTGCTCTAAGCTTGAAGATCTAAATTTGGATGTAGGAAAGAACTCCAAGGTGGTTACTGACAATTACTCCCAGATGCATGAACAACCAAGTGTTCCAGTTCACGAAGTAATATTTTCTGCCATTGACAAGCCAAAGCTTTTGAGCCAGCTGTCTGCATTGCTGTCTGATATTGGACTTAACATCCGTGAAGCACATGTTTTTTCAACGACGGATGGCTACTCCCTTGATGTATTTGTTGTGGATGGATGGCCAGTGGAGGACACAGATGGGTTGTACGAGGCCATGGAGAAAGCTGTAGCAAGAAGTGAGGGGTCTTGGTCTCGTTCTTTATATACCCATCCCACTGTGGAGAAGACCATAATAGAAGAAGAAAAATCTGGTGATTGGGAAATAGACAGGAGGCTGCTTAAGATAGGAGATAGAATAGCATCTGGATCTTGTGGAGATTTATATCATGGAGATTATCTTGGTCAAGATGTTGCTGTTAAGATTTTGAGATCTGAGCATTTGAACGATGCTTTAGAGGATGAGTTTGCTCAAGAAGTGGCAATTCTTAGGCAGGTGCATCATAGAAATGTTGTTCGTTTCATTGGTGCATGTACAAAATCTCCACATTTGTGGATTGTAACAGAGTATATGCCCGGAGGAAGTCTGTATGATTACCTGCATAAAAATCATAATACATTGGATATCTCTCAACTACTGAAGTTTGCGATCGATGTCTGCAAGGGTATGGAGTATTTGCACAGAAATGATATAATTCATAGGGATCTGAAGACAGCCAATCTGTTGATGGATATCGACAATGTTGTTAAAGTAGCAGATTTTGGAGTAGCTCGGTTCCTGAATCAGGGGGGAGTGATGACAGCAGAAACTGGAACATATAGATGGATGGCTCCAGAGGTTATAAACCATCAACCCTATGATCAGAAAGCTGATGTATTCAGTTTTTCCATAGTACTGTGGGAACTAGTAACTGCAAAGGTACCGTATGATGCCATGACTCCTCTACAAGCTGCCCTAGGTGTGAGACAGGGGTTACGCCCAGAACTTCCAAAGCAAGGGCACCCTAAACTAGGAAATTTAATGAAAAGATGTTGGGAAGCAATTCCAGCCAACCGACCATCCTTTTCAGAGATCACAGTTGAACTGGAAAATCTCCTTAAAGAAGTTGAGAATGAATCAAAAACTAACGGTGCTTGA 2628 0.43 MHDRREVETQNLKRHNDSYDDKAIVGFDVEWSTVDDEVNPRASLLKLGSRNGCLLVKLDYKSKLVHYSLRHFFLAKSIRRYVNNGLLGFKMGPVDAQDDYAGIPKEYRLYSHKMPDGCKVETQVMFADYTDFWIFLRYRVEEMFGNESEGMAIVGFDVEWSMVNGEVKASFLNLGNSHRCFLVKLGMSMDNVLKQFLLIKNITFVGIHIKEDLIKLKRDHGIVIRNVVDLAHLNKCDMVGSSSLLYPPRPACTLSCLAADRLLESHTREEQGDTSSQGHKSQLLRARHVVWHQASTWPRGVKDPLCKFFSSIFPLFQHPHREGERKRETAMDFFIEGVGESSSPPRTSGGFGNYDVRNDVYNRLVENGHGQEEEDFRELLDSHFNRLPQSYLLDVNIDRAEDVLLHQKLLALARDPSKRPVYNIRFLEHISTRVDGQDQQIVSVHSNARPSSPTSNGEAASSHKRARDCAAEFEPCSKLEDLNLDVGKNSKVVTDNYSQMHEQPSVPVHEVIFSAIDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPVEDTDGLYEAMEKAVARSEGSWSRSLYTHPTVEKTIIEEEKSGDWEIDRRLLKIGDRIASGSCGDLYHGDYLGQDVAVKILRSEHLNDALEDEFAQEVAILRQVHHRNVVRFIGACTKSPHLWIVTEYMPGGSLYDYLHKNHNTLDISQLLKFAIDVCKGMEYLHRNDIIHRDLKTANLLMDIDNVVKVADFGVARFLNQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKVPYDAMTPLQAALGVRQGLRPELPKQGHPKLGNLMKRCWEAIPANRPSFSEITVELENLLKEVENESKTNGA 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3491 875 SMART serkin_6 611 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3491 875 PRINTS Tyrosine kinase catalytic domain signature 768 778 IPR001245 GO:0004672|GO:0006468
Mibi01g3491 875 PRINTS Tyrosine kinase catalytic domain signature 722 740 IPR001245 GO:0004672|GO:0006468
Mibi01g3491 875 PRINTS Tyrosine kinase catalytic domain signature 830 852 IPR001245 GO:0004672|GO:0006468
Mibi01g3491 875 PRINTS Tyrosine kinase catalytic domain signature 787 809 IPR001245 GO:0004672|GO:0006468
Mibi01g3491 875 PRINTS Tyrosine kinase catalytic domain signature 685 698 IPR001245 GO:0004672|GO:0006468
Mibi01g3491 875 CDD STKc_MAP3K-like 617 859 - -
Mibi01g3491 875 SUPERFAMILY Ribonuclease H-like 149 234 IPR012337 -
Mibi01g3491 875 FunFam Serine/threonine-protein kinase isoform 1 601 689 - -
Mibi01g3491 875 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 377 865 - -
Mibi01g3491 875 SUPERFAMILY ACT-like 509 578 IPR045865 -
Mibi01g3491 875 Gene3D Phosphorylase Kinase; domain 1 600 688 - -
Mibi01g3491 875 MobiDBLite consensus disorder prediction 444 460 - -
Mibi01g3491 875 SUPERFAMILY Protein kinase-like (PK-like) 601 863 IPR011009 -
Mibi01g3491 875 Pfam Protein tyrosine and serine/threonine kinase 611 858 IPR001245 GO:0004672|GO:0006468
Mibi01g3491 875 ProSiteProfiles Protein kinase domain profile. 611 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3491 875 MobiDBLite consensus disorder prediction 444 466 - -
Mibi01g3491 875 Pfam 3'-5' exonuclease 147 233 IPR002562 GO:0003676|GO:0006139|GO:0008408
Mibi01g3491 875 Coils Coil 852 872 - -
Mibi01g3491 875 Gene3D Transferase(Phosphotransferase) domain 1 689 874 - -
Mibi01g3491 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672|GO:0006468
Mibi01g3491 875 ProSiteProfiles ACT domain profile. 510 584 IPR002912 -
Mibi01g3491 875 Gene3D - 1 82 IPR036397 GO:0003676
Mibi01g3491 875 Gene3D - 109 278 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3491 Mibi-ChrMibi01 61066663 61085586 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3491 355 871 MAP Kinase Kinase Kinase AT4G35780 49.060 3.12e-170 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mibi01g3491 PK_Tyr_Ser-Thr 1.5e-72 CL0016