Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3448 ATGGGATCGTTTCTTCTCTGCGCAATTCTAATGTCTGCTTTTGTACGAGTGGTTTCTGGGAATACAGAGGGTGAGGTTTTGAGTGCGTTGAAGAAGAACATGAACGATCCTAGCAATGTTCTTCAAAACTGGGATTCTTCCATTGTGAATCCCTGCACCTGGTTTGGTGTTCATTGTGATGGTGGAAGTGTCTCTCGTATTGATCTTGGAAATGCTGGCCTTTCGGGAGAACTAGTTCCAGAACTTGGTGAGCTAAGAAATTTGCAGCAATTTTTTTTGAATAATCCTGGGCTAACAGCACCAAAGGGATCTCCACCATCTCGCTCAGGTAAAAGTAATGCTGCAGCAATTGCAGGAGGTATTGCTGCTGGTGCTGCACTACTATTTTCTGTAACTCTCGCCATTATAGTCCTTGTACATTGCAGAAGAAGGAAATCACAAGTACATTTCTTTAATGTTGCTGCTGAGGATCCTTCTCCTGATGACGTAACTGATAATAATCACCTTGGTCAGCTTAAGAGGTTTTCTCTGATGGAGCTACATGTAGCAACAGATAACTTTAGTGACAGAAACATTATGGGAGTAGGCGGTTTTGGTAGGGTTTATAAAGGACGCTTAGCTGATGGTTCTCCTGTAGCAGTAAAGAGATTGAAAGGGGAAGGAGCACATAATAACAGCGATAAAGAAGTGCAATTTCAAAGAGAAGTGGAAATGATAAGTATGGCAGTTCATCGAAACTTGCTTCGCCTTATTGGGTTTTGCTCTACTCCAACTGAACGGTTGCTTGTCTATCCTCTCATGGTTAATGGAAGTGTAACTTCATGCTTAGGAGCACCAGAATATCTCTCCACTGGACAGTCTTCAGAGAAGACTGATGTTTTTGGATATGGTGTTATGCTTCTTGAACTAATCATTGGACAGAAAGCTTTTGACCTGGCTCAACTTGCACTGGACAATGATCATATCATGTTGCTTGACTGGGTGAAGGAATTGGTGAAGGAGAAGAGGATGGGGACTCTAGTGGATGCAGATTTAAGGGGAATTTGTGAGGAACAAGAAGTCGAAGGGGTAATCAAATTGTGTTTGCTATGCACACAAAGCAACCCTTTGAGAAGGCCAAGAATGTCAGAAGTGGTGAGAATGCTAGAAAGTGAGGGTTTGCATGAAGAATGGGAACAGTGGCAGAAAGAGATGTTGCAGAAAGATTATGTTGATTTTAATATCAGTCATGAGGCCGATAATACTGAATCTACTTTAAATTCAACTTCATGTATAGTAGCAGAAGAACTTTCGGGTCCACGATGA 1305 0.4192 MGSFLLCAILMSAFVRVVSGNTEGEVLSALKKNMNDPSNVLQNWDSSIVNPCTWFGVHCDGGSVSRIDLGNAGLSGELVPELGELRNLQQFFLNNPGLTAPKGSPPSRSGKSNAAAIAGGIAAGAALLFSVTLAIIVLVHCRRRKSQVHFFNVAAEDPSPDDVTDNNHLGQLKRFSLMELHVATDNFSDRNIMGVGGFGRVYKGRLADGSPVAVKRLKGEGAHNNSDKEVQFQREVEMISMAVHRNLLRLIGFCSTPTERLLVYPLMVNGSVTSCLGAPEYLSTGQSSEKTDVFGYGVMLLELIIGQKAFDLAQLALDNDHIMLLDWVKELVKEKRMGTLVDADLRGICEEQEVEGVIKLCLLCTQSNPLRRPRMSEVVRMLESEGLHEEWEQWQKEMLQKDYVDFNISHEADNTESTLNSTSCIVAEELSGPR 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3448 434 SUPERFAMILY L domain-like 22 101 - -
Mibi01g3448 434 SUPERFAMILY Protein kinase-like (PK-like) 169 398 IPR011009 -
Mibi01g3448 434 ProSiteProfiles Protein kinase domain profile. 187 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3448 434 Pfam Protein kinase domain 189 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3448 434 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 9 100 - -
Mibi01g3448 434 Gene3D Transferase(Phosphotransferase) domain 1 261 412 - -
Mibi01g3448 434 Pfam Protein tyrosine and serine/threonine kinase 278 382 IPR001245 GO:0004672|GO:0006468
Mibi01g3448 434 Gene3D Phosphorylase Kinase; domain 1 158 260 - -
Mibi01g3448 434 Gene3D Ribonuclease Inhibitor 19 113 IPR032675 -
Mibi01g3448 434 FunFam Somatic embryogenesis receptor kinase 1 157 266 - -
Mibi01g3448 434 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3448 Mibi-ChrMibi01 60301899 60307736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3448 127 434 Receptor kinase-like Gene Family AT4G33430 36.883 7.70e-55 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mibi01g3448 PK_Tyr_Ser-Thr 1.1e-06 CL0016