Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3426 ATGAACTTCGACAGGTTCATACCGAACTTCGTCAATGACGGTGGTAGGGAAGATGGTGGAGATATTGAATCGATTGTTGGAGGCTCACATGGGAGTAAGAATGTTTGGCAGCAGAGTATGGAATTTGGGTTGCAGGAGATCATCGAGGCCACGAATGGATTCCACAAAGAGAATGTTATTGGAAGTGGTGATCATGGTTCTGTTTATCTCGGTTTGTTGCGGGATAATACTCGAGTAGCAGTGAAGATGCTCGTAAGCTACAGTTGTGAAACTGAGGAATTTGCACTGCAAATGGACGCAATTGGATGCGCAAGACACAAGAAACTGGTCAGATTGCTTGGATATTGCACTGAGGGAGTTTACAGGATGTCAGTATCTGAATACATAGATAATGGAAATCTGTATCAATGGCTCCACCAGTTTCCAGGACAAGTCAGCCCTCTGACATGGGAAACCAGATCGAATATTATCCTCGGTGTGGCAAAAGGATTGGCCTACCTTCATGAGGACGTTGAACCCAAGATTCTCCACGGAAGCTTAAAATCCAGTAATATTTTGCTTGATCATCACTGGAATCCCAAGATCTCTGATTTTGGCCTTTCCAACCTTTTCACTACTAATATGATGGAAACATCGAGCGAGAGCAATGACATTTATAGTTTTGGAGTCCTTATAATGGAGATTATATCAGGAAGGATTCCTTTAGATCATAGTCTACCCCAGGAAGATTTAATTGATTGGTTTAAGTCAGAGATTGGAAATGAGAATATTGACCACCTGGTGGACTCAAAATTGCCTGAAATGCCTCCTTCTAAGGATTTCAAACAGATGATTTTGGTTTCTCTTCGATGTGTTGATCCTGATGTGAATCCAAAACTCAAAATGGGAGATGTAATTCGCATGCTCGAGCCTCGCCACCTGCTTCTCTCTGATGAATATGCCATTGCTAAGGAAGTTCATGAATACAGTCACTCGCCACAAAGTGACCCTACCTCAGAATCTGGTGACAAAGGTTCTCAGGATGTTAACAAGCCTAAGCAGTGA 1044 0.4262 MNFDRFIPNFVNDGGREDGGDIESIVGGSHGSKNVWQQSMEFGLQEIIEATNGFHKENVIGSGDHGSVYLGLLRDNTRVAVKMLVSYSCETEEFALQMDAIGCARHKKLVRLLGYCTEGVYRMSVSEYIDNGNLYQWLHQFPGQVSPLTWETRSNIILGVAKGLAYLHEDVEPKILHGSLKSSNILLDHHWNPKISDFGLSNLFTTNMMETSSESNDIYSFGVLIMEIISGRIPLDHSLPQEDLIDWFKSEIGNENIDHLVDSKLPEMPPSKDFKQMILVSLRCVDPDVNPKLKMGDVIRMLEPRHLLLSDEYAIAKEVHEYSHSPQSDPTSESGDKGSQDVNKPKQ 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3426 347 PANTHER OS01G0323000 PROTEIN 36 320 - -
Mibi01g3426 347 Gene3D Transferase(Phosphotransferase) domain 1 212 314 - -
Mibi01g3426 347 MobiDBLite consensus disorder prediction 319 347 - -
Mibi01g3426 347 Pfam Protein tyrosine and serine/threonine kinase 56 208 IPR001245 GO:0004672|GO:0006468
Mibi01g3426 347 Gene3D Transferase(Phosphotransferase) domain 1 129 211 - -
Mibi01g3426 347 Gene3D Phosphorylase Kinase; domain 1 27 128 - -
Mibi01g3426 347 ProSiteProfiles Protein kinase domain profile. 54 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3426 347 FunFam Putative receptor-like serine/threonine-protein kinase 129 317 - -
Mibi01g3426 347 SUPERFAMILY Protein kinase-like (PK-like) 34 303 IPR011009 -
Mibi01g3426 347 ProSitePatterns Protein kinases ATP-binding region signature. 60 82 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3426 Mibi-ChrMibi01 59851228 59853230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3426 27 303 Receptor kinase-like Gene Family AT4G02010 35.082 1.13e-52 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mibi01g3426 PK_Tyr_Ser-Thr 6.3e-26 CL0016