Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3422 ATGGTCTCCAAAAACCCAAACCCCCCAGAAGGCTTCTTCTGGGATCCTCCTGGCATGGCGCTTCCTGGCCTTGGCCCCTTCGCCGCCGCCGCAACAACCACCTCTGCCTCCGCCGCCAATTCATCCGACGACTCTTCCAAGAAGGTCCGCAAACCTTACACTATTACCAAGTCCAGGGAGAGCTGGAGCGAACCTGAACATGACAAATTCCTCGAAGCCCTCCAACTTTTTGATCGTGACTGGAAGAAGATTGAAGCATTTGTTGGATCAAAGACAGTTATTCAGATACGTAGTCATGCACAGAAATATTTTCTAAAAGTTCAGAAGAGTGGAGCAAATGAGCATCTACCTCCACCCAGGCCCAAAAGAAAAGCTGCTCATCCATATCCCCAGAAAGCTTCCAAAAATGCTCTGGTACACTCTGAAATGCCAGGATCCTCTGCAATGATAAAAACTCCAGGTACTAATGCTGCAGTGTCTTCTTGGTCAAACAAAACTTTGCAGATGGCCAATTTTTTGCATGGGCCAAAAATGAATAATAGTTGCAGTAGCAGTGAAAGCACTCAGAGAGCACGGCCAATTGGTCTATCCACTGGTCAAGGGAATAATAGCCATCCATTGAGAGTTCTGCCTGACTTTGCCCAAGTTTACAAGTTCATTGGCAGTGTTTTTGATCCAAAAGCCACTGGGCATATGCAGAAACTAAAATCGATGGATCCTATAGATGTTGAGACGGTACTACTATTGATGAGAAATCTGTCTATCAATTTAGCAAGCCCAGATTTTGAGGATCATAGAAAGTTGCTCTCTTCGTATGAGGTGAACGATGTAAAATTAAAATGTGGGCCTATTGTGGATTATTTCAACACTCTTTCTAGAGGGAATTCTGGGGAAAAGAGTGATCAATTATGTAAAAACGTTGCCTTCTATTTATGTATCAAAATGGCAAATAACAAAGGTGGACGCGCGACGAAAAGATTCACACTTAAGGGACCCAAATTACAATCCCAACCAGAATTAAAATGA 1026 0.4376 MVSKNPNPPEGFFWDPPGMALPGLGPFAAAATTTSASAANSSDDSSKKVRKPYTITKSRESWSEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGANEHLPPPRPKRKAAHPYPQKASKNALVHSEMPGSSAMIKTPGTNAAVSSWSNKTLQMANFLHGPKMNNSCSSSESTQRARPIGLSTGQGNNSHPLRVLPDFAQVYKFIGSVFDPKATGHMQKLKSMDPIDVETVLLLMRNLSINLASPDFEDHRKLLSSYEVNDVKLKCGPIVDYFNTLSRGNSGEKSDQLCKNVAFYLCIKMANNKGGRATKRFTLKGPKLQSQPELK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3422 341 SUPERFAMILY Homeodomain-like 53 109 IPR009057 -
Mibi01g3422 341 Gene3D - 62 109 - -
Mibi01g3422 341 MobiDBLite consensus disorder prediction 109 135 - -
Mibi01g3422 341 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 57 106 IPR006447 GO:0003677
Mibi01g3422 341 MobiDBLite consensus disorder prediction 178 203 - -
Mibi01g3422 341 MobiDBLite consensus disorder prediction 32 60 - -
Mibi01g3422 341 ProSiteProfiles SANT domain profile. 57 108 IPR017884 -
Mibi01g3422 341 MobiDBLite consensus disorder prediction 44 60 - -
Mibi01g3422 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Mibi01g3422 341 PANTHER SWI/SNF COMPLEX-RELATED 32 258 - -
Mibi01g3422 341 Pfam Myb-like DNA-binding domain 59 104 IPR001005 -
Mibi01g3422 341 SMART sant 58 106 IPR001005 -
Mibi01g3422 341 FunFam protein REVEILLE 6 isoform X1 61 109 - -
Mibi01g3422 341 CDD SANT 61 104 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3422 Mibi-ChrMibi01 59826402 59833690 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi01g3422 Myb_DNA-binding 1.1e-09 CL0123