Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3413 ATGCTTTTTCTTTGCAAACAGCTACCTCAACGTATATTTCTACGAATAGCTGTCCCACTTTTCCAATTCTCCAAGTTAAGCGTGGATCCTAATGGTCATGTGGATGATAAAAGTGAAAGTAGACTCTATATTGGGAACCTTGATCTTAGAATAACAGAAGCAACTCTGATAAAAATGTTCTCTCCTTATGGAAAGATTGTATCTGAGGATTTCTTATGGCACACTCGAGGCCGTAAGCGTGGAGAGCCACGTGGCTTTGCTTTTATCCAGTATAGCTCAAAAGAGGAAGCGGAATTGGCCAAGGAGAAAATGCATGGGAAGTTAGCTTGTGGCCGGCCACTGGTTGTTCGGCTTGCCAGTGAGAAGTGCCTGTTAGAAACTGCAAATAACTCTTCAAAAGTCACAGGAGAAGGGCACAAGATACACCATACTGGTAATAGTATGGGACAGACAAGTCGTAGTGCTAAAATAGCTGCAATAAAGAACAAATTGAAGTCCATAGAGGAGGAGAGCTCTAGGCCAAAGAAACAGAAGCAAAGTGATGATGTATCTTGA 555 0.4216 MLFLCKQLPQRIFLRIAVPLFQFSKLSVDPNGHVDDKSESRLYIGNLDLRITEATLIKMFSPYGKIVSEDFLWHTRGRKRGEPRGFAFIQYSSKEEAELAKEKMHGKLACGRPLVVRLASEKCLLETANNSSKVTGEGHKIHHTGNSMGQTSRSAKIAAIKNKLKSIEEESSRPKKQKQSDDVS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3413 184 MobiDBLite consensus disorder prediction 162 184 - -
Mibi01g3413 184 CDD RRM_RBM18 41 120 IPR039157 -
Mibi01g3413 184 Gene3D - 24 123 IPR012677 -
Mibi01g3413 184 MobiDBLite consensus disorder prediction 131 184 - -
Mibi01g3413 184 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 121 IPR000504 GO:0003723
Mibi01g3413 184 SUPERFAMILY RNA-binding domain, RBD 31 125 IPR035979 GO:0003676
Mibi01g3413 184 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 114 IPR000504 GO:0003723
Mibi01g3413 184 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 35 163 - -
Mibi01g3413 184 SMART rrm1_1 41 117 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3413 Mibi-ChrMibi01 59661884 59663470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3413 40 122 Eukaryotic Initiation Factors Gene Family AT1G71770 40.964 6.23e-13 64.3