Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3412 ATGGCGACTCAAATGCTTCTTCTACCTTTAATTCTCCTCGTTTCCCTTATTCCCTTTTCGTTTTCTTTCACTCCTTTGGATAATTATCTACTAAACTGTGGATCACATGCCAATGCATCACTCTTCAACCGAATTTTCACGGGTGATTCTGTAAAACCCGGTTCGGATTTTCTTGCTTCGGGTAAATCTATTACTCTTGTAAATCAAAATTCGCCTCTGAATTCTTCTTCCACTCTGTATCACACGGCCAGAGTTTTCACGAGCACTGGGAGCTATAGGTTCCATTTGAAGAGTAACGGTACCACTCATTTGGTACGTTTTCATTTCTCGCCCTTTTCAGCTCAAGGTTTTGATTTAAAATCTGCCAAGTTTAGTGTTCTGGTTGGTGGGAGTACGCTTCTGAAAGATTTTCAGTTGCGTAATGGCACGTTGATTAAGGAGTATATATTGAAGGTAGAATCAAATCTTCTAGAAATAGAGTTTAAGCCTGTGGGTGATTCGGGTTTTGGGTTTGTGAATGCTTTGGAGTTGTTTACAGCTCCTGTGGACTTCATTCTGGATTATGGAGCCAGGTTAGTGAGTTCTTCTGGGTTTGAAGAGTACAGGAATCTTTCGTCTCAGGTTTTAGAGACTGTTTATAGAATTAATGTTGGTGGCTTGAAGATAACTCCTTTCAATGATACCCTTTGGAGGACTTGGATTCCTGATGATGATTATTTGGTGTTTAAGGAAGCAGCTAAGCGTGTAGCTAGCACTCATACACCAAATTATCAGAAGGGAGGTGCAAGCCCAGAGATAGCTCCTGATCCAGTTTATATGACTGCCCAGGAGATGAATAGGGAAAATTCAAGCCTGGCTTCCAAGTTCAATATAACTTGGAAATTTCAGGTGGCTCAGGCCGGTGGTGGTGGTGGTGTTCGGCACTTGGTTCGGTTGCATTTCTGTGATATTGTTAGCTCTGCATTGAACTTGCTGTACTTTGATGTGTATCTTAATGGCTACTCTGCATACAAGGATCTTGATCTGTCATCTCTTACTGTCCATGTTCTTGCATCTCCAATCTATGTGGATTTTGTTGTGGATTCTGATGATTCAGGTTTTATAGAAATAAGTGTTGGCCCTTCTGATCTGACCAGCGCAATGAGGATGAATGCCTTGTTGAATGGGGCAGAGATCATGAAGATGGTCAGTGTTATGGATCCACATGTTGCTCATAAAAGTAAAAAATTATGGATATTGGTGGGCTCTCTTGTTGGAGGAGTTGTACTGCTTTTGGCAGTGGTTGGCCTTCTTCTTGCTTTTATGTGCTGGAAGAGGAAACCTAAACGAAAGACACCAGAAAGTGTAGGCTGGACACCTTTACGAATGTATGGAGGGAGCTCACTGAGCCGATTGTCTGAAGCTCTTGCTTCTCCAGGTTCTCATGGATATTTAGGCTTGAAAGTCCCTTTTGCTGATATACAAGCAGCAACAAACAATTTTGATAAAGATCTGATTATTGGGTCTGGAGGGTTTGGTATGGTTTACAAAGGGACGCTCAAAGAGAACATGAAGGTCGCTGTCAAGAGAGGGATGCCTGGGTCCAGGCAGGGCCTTCCCGAATTCCAGACTGAAATAGCAATTCTATCCAAAATCCGCCATCGTCATCTTGTTTCGCTTGTTGGTTTTTGTGAGGAAAATTCAGAGATGATACTTGTATATGAGTATGTTGAAAAAGGCCCCCTTAAAAAGCATTTGTATGGTTCAGGACAACCTCCTTTGTCTTGGAAGCAGCGTCTCGAGGTATGCATTGGTGCAGCTAGAGGTCTTCACTATCTTCACACTGGTTTTGCACAAGGAATCATCCACCGTGACATCAAATCGACTAACATATTGCTTGATGAAAACTATGTGTCCAAGGTTGCTGATTTTGGTCTCTCAAGATCTGGTCCATGTCTTGATGAAACCCATGTGAGTACTGGTGTGAAAGGCAGTTTTGGTTATCTGGATCCTGAGTATTTCCGGAGGCAGCAACTTACAGATAAATCGGATGTTTATTCGTTCGGGGTTGTGCTTTTCGAGGTTCTTTGTGCTAGACCTGCTGTTGATCCACAACTTGCCAGGGAACAGGTGAATTTAGCAGAATGGGCACTTGAATGGCAGCAGAAGGGCATGCTGGAGCACATCGTCGATCCCCATATTGCCCGGCAGATCAAACCCGAATCCTTGAAGAAATTCGGCGAAACAGCTGAGAAATGTTTGGCGGACTATGGTGTTGACCGGCCTACTATGGGTGATGTGTTATGGAACTTGGAATATGTACTTCAGATCCAAGAAAGTGGTCGACAAAGGGAACCAACAGCCAACTTGACAGCAACTATTGTTACTGGAGCTCCTTACAACACAAGAACACAGGGATATGATAATTGTAATTCAGACATAAGTACTAGCGAAGTTTTTTCCCAGTTAATGACCAATGAAGGCAGATAG 2469 0.4293 MATQMLLLPLILLVSLIPFSFSFTPLDNYLLNCGSHANASLFNRIFTGDSVKPGSDFLASGKSITLVNQNSPLNSSSTLYHTARVFTSTGSYRFHLKSNGTTHLVRFHFSPFSAQGFDLKSAKFSVLVGGSTLLKDFQLRNGTLIKEYILKVESNLLEIEFKPVGDSGFGFVNALELFTAPVDFILDYGARLVSSSGFEEYRNLSSQVLETVYRINVGGLKITPFNDTLWRTWIPDDDYLVFKEAAKRVASTHTPNYQKGGASPEIAPDPVYMTAQEMNRENSSLASKFNITWKFQVAQAGGGGGVRHLVRLHFCDIVSSALNLLYFDVYLNGYSAYKDLDLSSLTVHVLASPIYVDFVVDSDDSGFIEISVGPSDLTSAMRMNALLNGAEIMKMVSVMDPHVAHKSKKLWILVGSLVGGVVLLLAVVGLLLAFMCWKRKPKRKTPESVGWTPLRMYGGSSLSRLSEALASPGSHGYLGLKVPFADIQAATNNFDKDLIIGSGGFGMVYKGTLKENMKVAVKRGMPGSRQGLPEFQTEIAILSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSGQPPLSWKQRLEVCIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVSKVADFGLSRSGPCLDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQLAREQVNLAEWALEWQQKGMLEHIVDPHIARQIKPESLKKFGETAEKCLADYGVDRPTMGDVLWNLEYVLQIQESGRQREPTANLTATIVTGAPYNTRTQGYDNCNSDISTSEVFSQLMTNEGR 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3412 822 FunFam Putative receptor-like protein kinase 28 181 - -
Mibi01g3412 822 Gene3D - 28 182 - -
Mibi01g3412 822 Gene3D - 208 396 - -
Mibi01g3412 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Mibi01g3412 822 Gene3D Transferase(Phosphotransferase) domain 1 570 787 - -
Mibi01g3412 822 FunFam Receptor-like protein kinase FERONIA 208 397 - -
Mibi01g3412 822 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524
Mibi01g3412 822 CDD STKc_IRAK 500 765 - -
Mibi01g3412 822 Pfam Malectin-like domain 31 395 IPR024788 -
Mibi01g3412 822 SUPERFAMILY Protein kinase-like (PK-like) 480 765 IPR011009 -
Mibi01g3412 822 SMART serkin_6 494 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3412 822 PANTHER OS07G0166700 PROTEIN 481 771 IPR045272 GO:0004714|GO:0006468
Mibi01g3412 822 ProSiteProfiles Protein kinase domain profile. 494 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3412 822 Pfam Protein tyrosine and serine/threonine kinase 499 758 IPR001245 GO:0004672|GO:0006468
Mibi01g3412 822 Gene3D Phosphorylase Kinase; domain 1 467 569 - -
Mibi01g3412 822 FunFam Receptor-like protein kinase FERONIA 570 782 - -
Mibi01g3412 822 FunFam receptor-like protein kinase FERONIA 461 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3412 Mibi-ChrMibi01 59639295 59641763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3412 16 822 Receptor kinase-like Gene Family AT3G46290 48.801 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mibi01g3412 Malectin_like 1.5e-31 CL0202