Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3404 ATGTCGTCGCCGGGATTCCCGAGCGGTGCACCGCCGGATTTCTTCGCCGGAGTTAACCGATCCATGCCGGCAACCGCCATGAACGACCCTAACAACAACTCTAACAACCTCCAACCTTCTCTTCATCAACATCTTCATCCTCTGTACCGAACACAGAATCATCTTCTTCATCATCATCATCATCATCATCATCATCAACAGCAACATCAGCAGCGACAACAGCAGCAGACGATTTTCCTAGATCCTTACACGCAGATCGCGAGGCAAAATCCGAGCCTCATAGGGAAACGAACCCTAGCGGAATTTCAAAATCACCAGCAACAGAATCACAATCACAGCAACAATCAGGTCCTCTCAAGCCTTCTATTACGCTCTGTGAAGCCAAGAACCTTCCAGAACAACACTTCCCCTTTGTCTCCCATGTCTCCCATGGATTTCTCCATGTCACCTGAATTACCAAACCCTACGTTCTTCTCCTCCTCACAGCGATTCAACTTGCCTTTGCTCCACCAATCTCGCCCTCAGACCATGAATCTCCCAAACGCGGCCTTATCCAGAACGGCGCTTCCATATCTGAACGGGAATTTCGTTCAGGAAAGTGAGAAGAAGGTCATGGACCATCGTCTTCAGGAATTGGAGAAACAGCTTTTGGAGGATAACGATGAGGAAGAAGGCGATGCGGTTTCTGTTATCACCGGTAGCGAGTGGTCAATTCAGAATCTGATTACTACTCCCGGAGGCGCCGTGCAGAAACCGATTTCTTCTTCTTCGTCGCCGACTTCGTCTACGACCTCGACGACGTCGTCTTCTTCGTCCGTACCTTCACCTGCTTCTACATGTTTGAAGCAGTCGTTAATGGAGGCCGCATCTGCGATTTCCGAGGGCAAATCGGAAACCGCCGTGGAGATCTTGAATCGCTTGACTCAATTCTCAAACCCTAACGGAAATACAGATCAGAGATTGATGGATTGTATGATCTACGCCTTGAAATCTCGCCTGAACCAGAATCTAACGGTGGTTGGAGACCTCTTCACAGCCGAACACGCCGAGTCGACTCAGTTGCTCTACGAACATTCCCCCTGCTTCAAGGTCGGTTTCATGGCGGCAAATCTCGCCATCCTCGAAGCCGCATTCGAAGAAATCACAGAGAACAACATCAACAAGCTCCACATCGTCGATTTCGAAATCGGAAGGGGAAAACAATACATACACCTCCTCCACGACCTCTCTGTTCGTCAGAACGGGAAATCAGTCGCGGTGGTTATCACGGCGGTTGCAGAAAACTCCGGCGACGAGAGGTTGAAGACGGTGGGAGACATGTTAAGGCAAAAAGCGGATCAACTCGGAGTCAGGTTCGAGTTCAGAGCAGTGACAATGAAACTCACTGAGTTGACTCGCGAGTCACTTGGCTTGGAACCGGACGATTTTCTTGCAGTGAATTTCGCTTTCAAATTGTACAGAATGGCGGACGAAAGCGTTTCAACGGAGAATCCACGAGACGAACTTTTACGGCGCGTGAAGGCCATGGCCCCGCGCGTGGTCACGCTCGTCGAACAGGAGATCAACACCAATACGGCGCCGTTCGCGTCCCGTGTGTCCGAGTCGTTCGCGTACTACGGCGCGTTGCTCGACTCGCTCGAGCCGACCGTCCCGAGGGATAAGTATAACTCGGAGCGAGTCAAGTTGGAGAAGGGACTGAGTCATAAGATAGTCAATTTGATCGCGTGTGAGGGGAGGGACCGAGTGGAGCGTTGCGAAGTGTTTGGAAAGTGGAAGGCGCGTACGAGTATGGCTGGGTTTCAACTTAGAGGGATGAATCAGAGAATCGCCGAGTTGATTAAAGCGCGACTCAACCAGGGGAACCGAGTCAACCCGGGGTTTACTGTTAAGGAAGAGAATGGTGGGATTTGCTTTGGTTGGATGGGTCGAACACTCACCGTCGCATCTGCTTGGCGTTAA 1959 0.51 MSSPGFPSGAPPDFFAGVNRSMPATAMNDPNNNSNNLQPSLHQHLHPLYRTQNHLLHHHHHHHHHQQQHQQRQQQQTIFLDPYTQIARQNPSLIGKRTLAEFQNHQQQNHNHSNNQVLSSLLLRSVKPRTFQNNTSPLSPMSPMDFSMSPELPNPTFFSSSQRFNLPLLHQSRPQTMNLPNAALSRTALPYLNGNFVQESEKKVMDHRLQELEKQLLEDNDEEEGDAVSVITGSEWSIQNLITTPGGAVQKPISSSSSPTSSTTSTTSSSSSVPSPASTCLKQSLMEAASAISEGKSETAVEILNRLTQFSNPNGNTDQRLMDCMIYALKSRLNQNLTVVGDLFTAEHAESTQLLYEHSPCFKVGFMAANLAILEAAFEEITENNINKLHIVDFEIGRGKQYIHLLHDLSVRQNGKSVAVVITAVAENSGDERLKTVGDMLRQKADQLGVRFEFRAVTMKLTELTRESLGLEPDDFLAVNFAFKLYRMADESVSTENPRDELLRRVKAMAPRVVTLVEQEINTNTAPFASRVSESFAYYGALLDSLEPTVPRDKYNSERVKLEKGLSHKIVNLIACEGRDRVERCEVFGKWKARTSMAGFQLRGMNQRIAELIKARLNQGNRVNPGFTVKEENGGICFGWMGRTLTVASAWR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3404 652 Pfam GRAS domain family 281 652 IPR005202 -
Mibi01g3404 652 MobiDBLite consensus disorder prediction 1 40 - -
Mibi01g3404 652 ProSiteProfiles GRAS family profile. 272 652 IPR005202 -
Mibi01g3404 652 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 237 642 IPR005202 -
Mibi01g3404 652 MobiDBLite consensus disorder prediction 245 278 - -
Mibi01g3404 652 MobiDBLite consensus disorder prediction 24 40 - -
Mibi01g3404 652 Coils Coil 202 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3404 Mibi-ChrMibi01 59602881 59604839 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3404 68 652 GRAS Transcription Factor Family AT5G52510 49.920 9.62e-164 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mibi01g3404 GRAS 4.2e-99 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g3404 01 59602881 59604839 Mibi01g3404 01 59602881 59604839 ECH