Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3387 ATGTTGCAAGGAGACGTTGGGACGCCTGGACGTGTTTTAGCTCACCTCGAAAACACTAAAGGTTTTAGTCTCAACAAATTGAAGTATTTGGTCTTAGATGAAGCAGACAGGCTGTTGAATGAGGATTTTGAGGAATCTCTCATGAAGATTTTGCAAACTATCCCGAAACAAAGAAGAACATTTCTATTTTCTGCTACAATGACCAATAAGGTTGAGAAACTCCAAAAGCTTAGTTTAAGGAATGCTGTAAAGATCGAAGCAGCGTCTAAATACTCTACTGTTGACACACTGAAGCAGTTTTATCACTTTTTGCCTGCTAAGCACAAGGATTGCTACTTTGTTCATATACTGCTTGAAATGGCTGGAAGCACATCAATGGTTTTCACACGCACATGTGATGCAACCCAGCTACTGGCTTTGACTTTAAGAAATTTGGGGTTGAAAGCCATCCCCCTTAATGGTCATTTGAGCCAGTCAGAGAGAATTGGAGCCTTGAATAAGTTCAAGTCCGGAGATTGCAATATCCTCGTTTGTACTGATGTGGCTAGTAGAGGGCTGGACATTCCAACAGTAGATGTGGTTATCAACTATGATGTTCCAACAAACTCCAAGGATTATAATCATCGAGTGGGAAGAACTGCCCGTGCTGGGCGATCTGGGGTTGCCATTTCCCTTGTAAATCAATATGAGCTGAATCCGTTCCTTGCTATAGAGAACCGTATAGGCATGAAGTTACCAGAGTATCCTGCGCGGGAAGAGGAAGTTCTTCTTCTGAAAGAGCGTGTTTGTGAGGCCATAAGATTAGCTGTAATGATTATGAAAGAGAATGGAGAGAAGAGGAGATACCTGGGAGAAGACCATGAAGAAGGAGATACGGAGAATTATTTAGACCTCAAGGATAAAAAACCTTCCTGGAAGTACAAGAGAATATGAACACTGTTGAAACGCAAAAATACAAATGTTTTAGATATGAAGTTGCCAGAGTATCCTGCGCAGGAAGAGGAAGTTCTTCTTATGAAAGAGCGTGTTTGTGAGGCCAGAAGATTAGCTGTAACGAGTATGAAAGAGAATGGAGAGAAGAGCAGATACCGGGGAGAAGACCATGAAGAAGGAGCCACGTCCAAACATTTAGGCCACAGGGATAGAAAACCTTCCAAGAAGTACAAGATCCGAAAGCTATTGTATGCGGGTAGTTACGTTATCTATCTTTAA 1212 0.4183 MLQGDVGTPGRVLAHLENTKGFSLNKLKYLVLDEADRLLNEDFEESLMKILQTIPKQRRTFLFSATMTNKVEKLQKLSLRNAVKIEAASKYSTVDTLKQFYHFLPAKHKDCYFVHILLEMAGSTSMVFTRTCDATQLLALTLRNLGLKAIPLNGHLSQSERIGALNKFKSGDCNILVCTDVASRGLDIPTVDVVINYDVPTNSKDYNHRVGRTARAGRSGVAISLVNQYELNPFLAIENRIGMKLPEYPAREEEVLLLKERVCEAIRLAVMIMKENGEKRRYLGEDHEEGDTENYLDLKDKKPSWKYKRIXTLLKRKNTNVLDMKLPEYPAQEEEVLLMKERVCEARRLAVTSMKENGEKSRYRGEDHEEGATSKHLGHRDRKPSKKYKIRKLLYAGSYVIYL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3387 403 Pfam DEAD/DEAH box helicase 6 74 IPR011545 GO:0003676|GO:0005524
Mibi01g3387 403 MobiDBLite consensus disorder prediction 355 382 - -
Mibi01g3387 403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 238 IPR027417 -
Mibi01g3387 403 Gene3D - 94 263 IPR027417 -
Mibi01g3387 403 Gene3D - 5 93 IPR027417 -
Mibi01g3387 403 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 85 IPR014001 -
Mibi01g3387 403 CDD SF2_C_DEAD 97 226 - -
Mibi01g3387 403 Pfam Helicase conserved C-terminal domain 112 217 IPR001650 -
Mibi01g3387 403 MobiDBLite consensus disorder prediction 355 378 - -
Mibi01g3387 403 SMART helicmild6 136 217 IPR001650 -
Mibi01g3387 403 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 6 383 - -
Mibi01g3387 403 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 31 39 IPR000629 -
Mibi01g3387 403 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 96 256 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3387 Mibi-ChrMibi01 59311901 59323406 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3387 7 249 Eukaryotic Initiation Factors Gene Family AT3G19760 29.675 4.05e-34 129