Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3380 ATGCCAGCTGAAAGACAAAAGGTTTCTGGTACTCCAGATGTCATGAAAGCAGAGGATGGAAATGACTCCTTAGAACCCGCATTCAGAAAGGCTATTGGCAGAGATCCTTTTCTTTCTATTCCAAGGGCTACTGACAATCCAGTCCAGTGGTTAAACTTAATTCAGGCGTTAGATCCGCAACAGCAAGAACTGCCAGGCTGGCCTTTGGTCTCTCCTCTGAAGCTTCAGTTGCAGAAGTGTGAAAAGTGTTCCCGAGAATTCTGCTCTTCAATTAATTATAGAAGACACATACGTGCTCACCATCGGTTGAAAAAGATTGATAAGGATTCTACAAAAAATAGAGATCTGTTAGGAGCATACTGGGATAAGCTATCTGTAGATGAGGCAAAAGAAGCTGTATCTTTCAAGAATGTTATGCTGGAGGAGGTTCCAGGGTCTTCTATTTTAAAAGCGCTGACAAATCTTGTTCGAAAACAAGGATTTTCTTCGTTTCCACAGAATTATCTGAAGGCTGGTTCTGCCCTTTTGGATATTGTTCAAGCTAGATCTTCCATTCTTTCTATATCTTCCAAGGAGCTGTTTGATATCCTTGATTGTGCCAGTGAAAAAACATTTTTATGTGGGGCGCCGGTATCAATGCAAAAATATATTTTTGGTGGAGAACCGGGAAAGATCGGCCTTGAACAAAAAAACCTAGTTGCTTGTACCAGTTTCTTGCTAGAACATGAATTGGTTAAGGCATGGCTTGTTGACAAGGAAGCTGAAGCATTAAGATTCCAGAAGCTGCTAGTGGATGAGGAGGAAGCTGCTCAGAAAAGGACGTTTTGTTTAATTATGTTTTCTATGGTTTATAGACAAGCTGAGATTTTGGAGAGGAAACGCCGGAAAAAGCTTAGGCAAAAAGAACAAAAGGAAAGGGTGCTAAAGCTTGAGGATGATGCAGAAATGAAAAAGAATGGCATAATCACAGAAGTTGACAGTTCATTAGCAGAAGCACTTTCAGATCCATGTGGCTCTGGAGAACATAATCCAGATACACTTGCAGTCCGTGGATCTTCACTACTTGTGCCACTCCATTGCACAGACACTGATGAAGGTGTGGATGGGGGTTCGCTGTCCGGGTATGAAAGTGGCATTGATCAGAACATTGAGCAAGAGACAACCCAAGGACATGTTTGTCAACATGTTGCGGTTGCTGAACCAAAATCACAATGGGCTGTAGCTAATGGTTTTCATTCAAATCATAACTCTCAATTTTTCAAGTCCGGAGTCATTCAGAAGTATGAGAGCCACCGCAGTCAAAAAGCTGCTCCCATGCTTAATGGTAACAAAGTATGGAGCCGAAAGTCTAAGCAAAAAATTATTGGGGTGCATTCAAAAGCCAAACTAGAGAAAGAACTGGATGAGGGTAAAAACCATGAAGTTTTAATAGGGTCTATATCTGTTACTCTTGGAAATTGCAGCCAATCAGAGGATAATCTTGTGCCATATGGAGAGGACTACATAGTAGGGAATTTAACCAAGCATAGTAATACTAAGGAGAAGCCAGTCAAACCTGATTCTGTACAAATCAGTAACAATCCGTCGATAGCTAAGGCTGTTAAGCTTTGGAGGCCAGTTACTCATCATGGAACTAAATATTCATTACCACTTCTCAATGTTGGTCCCGAAGCTAATGCAATAGATGATAAAAAAGATTATCAAAATTTATCCAATCAAAATTCTTCAAGGCTGTGTGACTTGGGTAAGAGTGATAGTAATCTAGAGGGCAAAGTGGGTCCGAGAAACTTGCACTTTTCCAGTCAAGCTGCTAAAGCCTTTCTTGCAGAAAGATGGAAACTAGCTATCTCGTCAAACCATGTGGAATTGGTCCTTTCACCTGACTCTGGATCTCCTAAGGGCCTGGAGGCACAAAATTGTGGAATAGCTGACAAATGCTGCATATTTGCAAGTGCAGAGACTGAGCTGCCTGCGACCTCATCTAAATCCAAAATCAAAATGAAACCCGAAAAGGTTGTCAAGATTAAAAGGTGGCAATATGGTGGGACAGGAGATTGTGCATTGAGGCTCTTTCTCCCTGAGTTTTTACTTTTATACCATGGGAGATTGAGATGGCAAGCTCTTCTGCCTTCTGTGCGAATACCATAA 2148 0.4143 MPAERQKVSGTPDVMKAEDGNDSLEPAFRKAIGRDPFLSIPRATDNPVQWLNLIQALDPQQQELPGWPLVSPLKLQLQKCEKCSREFCSSINYRRHIRAHHRLKKIDKDSTKNRDLLGAYWDKLSVDEAKEAVSFKNVMLEEVPGSSILKALTNLVRKQGFSSFPQNYLKAGSALLDIVQARSSILSISSKELFDILDCASEKTFLCGAPVSMQKYIFGGEPGKIGLEQKNLVACTSFLLEHELVKAWLVDKEAEALRFQKLLVDEEEAAQKRTFCLIMFSMVYRQAEILERKRRKKLRQKEQKERVLKLEDDAEMKKNGIITEVDSSLAEALSDPCGSGEHNPDTLAVRGSSLLVPLHCTDTDEGVDGGSLSGYESGIDQNIEQETTQGHVCQHVAVAEPKSQWAVANGFHSNHNSQFFKSGVIQKYESHRSQKAAPMLNGNKVWSRKSKQKIIGVHSKAKLEKELDEGKNHEVLIGSISVTLGNCSQSEDNLVPYGEDYIVGNLTKHSNTKEKPVKPDSVQISNNPSIAKAVKLWRPVTHHGTKYSLPLLNVGPEANAIDDKKDYQNLSNQNSSRLCDLGKSDSNLEGKVGPRNLHFSSQAAKAFLAERWKLAISSNHVELVLSPDSGSPKGLEAQNCGIADKCCIFASAETELPATSSKSKIKMKPEKVVKIKRWQYGGTGDCALRLFLPEFLLLYHGRLRWQALLPSVRIP 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3380 715 MobiDBLite consensus disorder prediction 1 21 - -
Mibi01g3380 715 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 105 IPR013087 -
Mibi01g3380 715 ProSitePatterns Zinc finger C2H2 type domain signature. 80 101 IPR013087 -
Mibi01g3380 715 Coils Coil 287 307 - -
Mibi01g3380 715 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 676 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3380 18 676 C2H2 Transcription Factor Family AT4G25610 39.275 1.32e-131 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi01g3380 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g3380 01 59238210 59243389 Mibi01g3380 01 59238210 59243389 ECH