Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3375 ATGTCAGATTCCGACGATGAAAACCCAGAACTTTCTCCTCAATCAAAGCCCGCCGCCACCGCAGAACCTGGTTCTGTAATGGATTTCGAACTCGACCTTGAGGGTTCTTGGCCTTTAGATCAGATAGCTTTCTCTTCTAGTAACCCCATGTCTCCTTTTCTGATTCCTGCCACATCTGACCAACCTTCTTCTCCTTTATGGGTTTTCTCAGATGTTGACGATGATAGGCAAGCTAAGCTTGCTGCTTCGGCCCTCTCTGATGTTCATCGATTGCTCTCCTGCAATTCGAATTCAGTAGCTGAAAAACCAGTGGAGAACGAGGAGACTAAGAAAACCCCTTCATCCTTCGTTTCCATGCCACCAATACCATTAGAAACTCCAGAATGGTATTGTCTGATTAAAGAAAGGATGACACAAGCACTAAGGTACTTCAAAGAATTGGCTGACCAGAATGTTCTGGCTCAGGTTTGGGCACCTGTAAGGATGGGGAACCAGTATGTCCTTACAACTTCAGGGCAACCCTTTGTTCTTGATCCACATAGTAATGGACTCTATCAATATAGAACAGTCTCACTGATGTACATGTTTTCAGCAAGTGGGGATAATGATGGAATCCTGGGGCTTCCCGGTCGTGTTTTCCATCAGAAGTTGCCAGAATGGTCTCCCAATGTTCAATATTATTCTAGTAAAGAATATCCCCGCCGAAATCATGCTCAACATTACAATGTTCGTGGAACCGTGGCTTTGCCTGTGTTTGAACCTTCAGGGCAGTCATGTATTGGTGTGCTGGAGTTGATAATGACTTCTCAGAAGATTAACTATGCCCCTGAGGTTGATAAAGTCTGCAAAGCTCTTGAGGCAGTTAATTTGAAGAGTTCAGAAATTCTGGAACATCAATTCACTCAGATTTGTAATGAAAGCCGTCAGAATGCATTAGCAGAGATCTTGGAGATATTGACAGTGGTCTGTGAAACTCATAAATTACCTCTGGCCCAAACATGGGTTCCCTGTAGGCACCGAAGTGTTTTGGCCAATGGTGGTGGCCTGAAGAAGAGCTGCTCCAGCTTTGATGGTAGTTGCATGGGGCAAGTTTGCATGTCTACTACTGATGTTGCATTCTATGTCATAGATGCTCATATGTGGGGTTTCCATGAGGCCTGTGCTGAGCATCACTTGCAACAAGGTCAAGGGGTTGCTGGGAGGGCATATTTGTCAGGCAACATGTGCTTCTCTGGGAACATTACCCAGTTCTGCAAAATTGAATACCCGTTGGTACATTATGCTCGAATGTTTGGTGTAACCAGCAGTTTTGCTGTCTGTTTGCAAAGCTCTCATACAGGACGCGATGATTATATATTGGAGTTCTTTCTACCTCCGAAGGTCACAGACTTAAACGAACAAAAGACTATGTTGGGATCTATAGTAGCAACAATGAAACAGCATTTCCATAGTCTTAAAATAGCTGCTGGTCTTGAACTCGAGGAGGAATGTTCAGTTGAAATCATTGAAGCAACGGATGAAAGGGTTTATTCAAGACTCGAATCTATTATGATTACCCAACCTACTAAATTGCCACATGGACCTGATGCCTTGCCAAATATGGGGGAGATTTTACCACTGGATGCATCAGATCAGCAAATGACATTCTTAGATGATATGAATGGTGGAGGGAGTCTTGGTGACACAGCTGGTGGAACCTGCGATCAGATATCCCCCTTGGAGACTAAAAACATAAAGAAACCCTCAGAGAGAAAACGGGGAAAAACAGAGAAATCAATTAGTCTTGAAGTCTTGCAAAACTATTTTGCTGGGAGTCTTAAAGATGCTGCAAAGAGTCTTGGCGTTTGCCCTACTACGATGAAGCGCATCTGCAGGCAGCATGGGATATCCCGTTGGCCGTCACGGAAGATTAACAAGGTTAATCGTTCCTTGTCCAAGCTCAAGCGGGTCATTGAATCAGTCCAAGGTGCTGAAGGAGCATTTGGTTTAAATTCTCTCAGTACCAGTCCACTTCCCATGGCCGTTGGTTCCCTTCCTGAACCTTCAAACAAGTTCTGCCAACAAGCCTCGCCAAGCGCACAACTAGCAGAACCACAGATGAAAGAGAGCGAATTGGATGCCTCCAAAGTATCAGAAACTAACAGGCAAACTGAGGTAGACCGTCATTTGTTCGGAGGAAGGGTACAAAGTCCTGAGACACATGAGAAAAGTGGGTCCAGTCAGGATTTTAGTAAAGGCCATAAAGGACCTAGGACAGGGAGTGCCTCAAGCGAAGATGGGGCAAACCCTGGTTCTCATGGTTCGTGTCATGGTAGCCCCCCTATCGAAAGCTCACCTCCAAAAGATATATTCGTTACAACCCATAATGATCAGTATGTTGTGGCTCGGGGATCGCCGGAGTTGCCGCCAGCAATTAAACAGAATAGTCTTCCTGGGTATGCCGTGCCCAGCCTTATGCCCACAGAAATTCAGGAGTCATTTGGAGGAATGCTGATAGAGGATGCAGGTAGTTCCAAAGACTTGAGAAATTTGTGTCCAGCAGTAGCCGATGCCAATGTGGAGGATCACTTACCAGAAGCTTCTGCAGCTAATCCTCCAGGCTCTGACTTGGGTTTTAAGCAATGCACCAACACTCTTGGTGAAACGATGGCACCTTTTGCAGCTCGGAGAGAAATGAAGACTGTGACTATAAAAGCAACATACAGAGAAGATATCATACGGTTTCGCATCTCCTTTTCCTCGGGTATTGTGGAGCTGAAAGAAGAAGTTGCCAAAAGACTGAAACTAGAGGTAGGTACCTTTGATATCAAGTACCTGGATGATGATCAAGAATGGGTTTTGATAGTCTGTGATGCAGACCTTCAAGAGTGCATGGATATCTCTAGGTCATCCGGTACTAACATAATCAGGCTTTTGGTACATGATATAACTTCCAATCTCGGAAGTTCATGTGAGAGCTCAGGGGAGTGA 2970 0.4498 MSDSDDENPELSPQSKPAATAEPGSVMDFELDLEGSWPLDQIAFSSSNPMSPFLIPATSDQPSSPLWVFSDVDDDRQAKLAASALSDVHRLLSCNSNSVAEKPVENEETKKTPSSFVSMPPIPLETPEWYCLIKERMTQALRYFKELADQNVLAQVWAPVRMGNQYVLTTSGQPFVLDPHSNGLYQYRTVSLMYMFSASGDNDGILGLPGRVFHQKLPEWSPNVQYYSSKEYPRRNHAQHYNVRGTVALPVFEPSGQSCIGVLELIMTSQKINYAPEVDKVCKALEAVNLKSSEILEHQFTQICNESRQNALAEILEILTVVCETHKLPLAQTWVPCRHRSVLANGGGLKKSCSSFDGSCMGQVCMSTTDVAFYVIDAHMWGFHEACAEHHLQQGQGVAGRAYLSGNMCFSGNITQFCKIEYPLVHYARMFGVTSSFAVCLQSSHTGRDDYILEFFLPPKVTDLNEQKTMLGSIVATMKQHFHSLKIAAGLELEEECSVEIIEATDERVYSRLESIMITQPTKLPHGPDALPNMGEILPLDASDQQMTFLDDMNGGGSLGDTAGGTCDQISPLETKNIKKPSERKRGKTEKSISLEVLQNYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKRVIESVQGAEGAFGLNSLSTSPLPMAVGSLPEPSNKFCQQASPSAQLAEPQMKESELDASKVSETNRQTEVDRHLFGGRVQSPETHEKSGSSQDFSKGHKGPRTGSASSEDGANPGSHGSCHGSPPIESSPPKDIFVTTHNDQYVVARGSPELPPAIKQNSLPGYAVPSLMPTEIQESFGGMLIEDAGSSKDLRNLCPAVADANVEDHLPEASAANPPGSDLGFKQCTNTLGETMAPFAARREMKTVTIKATYREDIIRFRISFSSGIVELKEEVAKRLKLEVGTFDIKYLDDDQEWVLIVCDADLQECMDISRSSGTNIIRLLVHDITSNLGSSCESSGE 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3375 989 MobiDBLite consensus disorder prediction 732 763 - -
Mibi01g3375 989 Pfam RWP-RK domain 592 640 IPR003035 -
Mibi01g3375 989 ProSiteProfiles RWP-RK domain profile. 579 660 IPR003035 -
Mibi01g3375 989 PANTHER PROTEIN NLP8 60 988 IPR045012 GO:0003700
Mibi01g3375 989 MobiDBLite consensus disorder prediction 1 32 - -
Mibi01g3375 989 MobiDBLite consensus disorder prediction 702 729 - -
Mibi01g3375 989 FunFam RWP-RK domain-containing protein 891 975 - -
Mibi01g3375 989 MobiDBLite consensus disorder prediction 681 697 - -
Mibi01g3375 989 ProSiteProfiles PB1 domain profile. 894 976 IPR000270 GO:0005515
Mibi01g3375 989 CDD PB1_NLP 895 975 IPR034891 -
Mibi01g3375 989 Gene3D - 891 975 - -
Mibi01g3375 989 SUPERFAMILY CAD & PB1 domains 891 979 - -
Mibi01g3375 989 SMART PB1_new 894 976 IPR000270 GO:0005515
Mibi01g3375 989 MobiDBLite consensus disorder prediction 674 783 - -
Mibi01g3375 989 Pfam PB1 domain 894 975 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3375 Mibi-ChrMibi01 59191555 59195849 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3375 267 989 NLP Transcription Factor Family AT4G24020 54.839 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mibi01g3375 PB1 8.5e-19 CL0072